Difference between revisions of "TSS:Hg 233749.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000433834.5:-27 AK301442:-70 ENST00000674390.1:-254 NM_001282162:342 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance=- | + | |distance=-27 |
|distance_to_tss=83 | |distance_to_tss=83 | ||
|end=186400655 | |end=186400655 | ||
| Line 11: | Line 11: | ||
|gene_alias=TISR | |gene_alias=TISR | ||
|gene_description=oculomedin | |gene_description=oculomedin | ||
| − | |gene_id= | + | |gene_id=832 |
| − | |gene_name= | + | |gene_name=capping actin protein of muscle Z-line subunit beta |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:1491 |
| − | |gene_symbol= | + | |gene_symbol=CAPZB |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:1491 |
|nearest_ensembl=ENSG00000262180 | |nearest_ensembl=ENSG00000262180 | ||
|nearest_promoter_id=NM_022375 | |nearest_promoter_id=NM_022375 | ||
|nearest_refseq=NM_022375 | |nearest_refseq=NM_022375 | ||
|nearest_unigene=Hs.679230 | |nearest_unigene=Hs.679230 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=186400654 | |start=186400654 | ||
|start_of_center_position=19484636 | |start_of_center_position=19484636 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000433834.5 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_233749.1 | |tss_id=hg_233749.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=B1AK88 |
}} | }} | ||
Revision as of 12:54, 17 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 19484636 |
|---|---|
| End of the center position in the TSS region: | 19484637 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000433834.5 |
|---|---|
| Distance: | -27 |
| Num_trans: | 4 |
| All_trans: | ENST00000433834.5:-27 AK301442:-70 ENST00000674390.1:-254 NM_001282162:342 |
TATA-Box annotation
| Distance to TSS: | 83 |
|---|---|
| Nearest PromoterID: | NM_022375 |
| Entrez ID: | 10896 |
| Nearest Unigene: | Hs.679230 |
| Nearest Refseq: | NM_022375 |
| Nearest Ensembl: | ENSG00000262180 |
| Gene Name: | capping actin protein of muscle Z-line subunit beta |
| Gene Alias: | TISR |
| Gene Description: | oculomedin |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.333333 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
