Difference between revisions of "TSS:Hg 236835.1"
From referenceTSS
| Line 4: | Line 4: | ||
|DLX9= | |DLX9= | ||
|OFC15= | |OFC15= | ||
| − | |all_trans= | + | |all_trans=ENST00000226021.5:79 NM_000727:79 L07738:115 AK313852:124 BC113492:126 BC113486:126 BC069493:138 HQ258641:182 KJ890809:182 KJ896532:182 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 13: | Line 13: | ||
|entrez_id=1748 | |entrez_id=1748 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=BP1 | + | |gene_alias=BP1{{!}}DLX7{{!}}DLX8{{!}}DLX9{{!}}OFC15 |
|gene_description=distal-less homeobox 4 | |gene_description=distal-less homeobox 4 | ||
| − | |gene_id= | + | |gene_id=786 |
| − | |gene_name= | + | |gene_name=calcium voltage-gated channel auxiliary subunit gamma 1 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:1405 |
| − | |gene_symbol= | + | |gene_symbol=CACNG1 |
| − | |gene_synonyms= | + | |gene_synonyms= |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:1405 |
|nearest_ensembl=ENSG00000108813 | |nearest_ensembl=ENSG00000108813 | ||
|nearest_promoter_id=NM_001934 | |nearest_promoter_id=NM_001934 | ||
|nearest_refseq=NM_001934 | |nearest_refseq=NM_001934 | ||
|nearest_unigene=Hs.591167 | |nearest_unigene=Hs.591167 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=49972859 | |start=49972859 | ||
|start_of_center_position=67044474 | |start_of_center_position=67044474 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000226021.5 NM_000727 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_236835.1 | |tss_id=hg_236835.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q06432 |
}} | }} | ||
Revision as of 14:06, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 67044474 |
|---|---|
| End of the center position in the TSS region: | 67044475 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000226021.5 NM_000727 |
|---|---|
| Distance: | 79 |
| Num_trans: | 10 |
| All_trans: | ENST00000226021.5:79 NM_000727:79 L07738:115 AK313852:124 BC113492:126 BC113486:126 BC069493:138 HQ258641:182 KJ890809:182 KJ896532:182 |
TATA-Box annotation
| Distance to TSS: | 94 |
|---|---|
| Nearest PromoterID: | NM_001934 |
| Entrez ID: | 1748 |
| Nearest Unigene: | Hs.591167 |
| Nearest Refseq: | NM_001934 |
| Nearest Ensembl: | ENSG00000108813 |
| Gene Name: | calcium voltage-gated channel auxiliary subunit gamma 1 |
| Gene Alias: | BP1|DLX7|DLX8|DLX9|OFC15 |
| Gene Description: | distal-less homeobox 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
