Difference between revisions of "TSS:Hg 237075.1"
From referenceTSS
| Line 5: | Line 5: | ||
|DFNA26= | |DFNA26= | ||
|HEL-176= | |HEL-176= | ||
| + | |all_trans=NM_001353233:149 NM_001198548:149 NM_001198546:149 NM_001353232:149 NM_001353237:149 AB017800:149 ENST00000589544.5:229 BC000313:470 ENST00000590712.5:495 AK297185:495 | ||
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=149 |
| − | |distance_to_tss= | + | |distance_to_tss=2772 |
|end=81510032 | |end=81510032 | ||
|end_of_center_position=34223700 | |end_of_center_position=34223700 | ||
|entrez_id=71 | |entrez_id=71 | ||
|gc_percent=0.383085 | |gc_percent=0.383085 | ||
| − | |gene_alias=ACT | + | |gene_alias=ACT{{!}}ACTG{{!}}DFNA20{{!}}DFNA26{{!}}HEL-176 |
|gene_description=actin gamma 1 | |gene_description=actin gamma 1 | ||
| − | |gene_name= | + | |gene_id=8715 |
| + | |gene_name=nucleolar protein 4 | ||
| + | |gene_source=HGNC:7870 | ||
| + | |gene_symbol=NOL4 | ||
| + | |gene_synonyms=CT125 HRIHFB2255 NOLP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7870 | ||
|nearest_ensembl=ENSG00000184009 | |nearest_ensembl=ENSG00000184009 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001199954 |
|nearest_refseq=NM_001614 | |nearest_refseq=NM_001614 | ||
|nearest_unigene=Hs.514581 | |nearest_unigene=Hs.514581 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=81510021 | |start=81510021 | ||
|start_of_center_position=34223699 | |start_of_center_position=34223699 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001353233 NM_001198548 NM_001198546 NM_001353232 NM_001353237 AB017800 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_237075.1 | |tss_id=hg_237075.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=O94818 | ||
}} | }} | ||
Revision as of 14:11, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 34223699 |
|---|---|
| End of the center position in the TSS region: | 34223700 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001353233 NM_001198548 NM_001198546 NM_001353232 NM_001353237 AB017800 |
|---|---|
| Distance: | 149 |
| Num_trans: | 10 |
| All_trans: | NM_001353233:149 NM_001198548:149 NM_001198546:149 NM_001353232:149 NM_001353237:149 AB017800:149 ENST00000589544.5:229 BC000313:470 ENST00000590712.5:495 AK297185:495 |
TATA-Box annotation
| Distance to TSS: | 2772 |
|---|---|
| Nearest PromoterID: | NM_001199954 |
| Entrez ID: | 71 |
| Nearest Unigene: | Hs.514581 |
| Nearest Refseq: | NM_001614 |
| Nearest Ensembl: | ENSG00000184009 |
| Gene Name: | nucleolar protein 4 |
| Gene Alias: | ACT|ACTG|DFNA20|DFNA26|HEL-176 |
| Gene Description: | actin gamma 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.383085 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
