Difference between revisions of "TSS:Hg 239248.1"
From referenceTSS
| Line 3: | Line 3: | ||
|chr=chr21 | |chr=chr21 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=4032 | |distance_to_tss=4032 | ||
|end=8445183 | |end=8445183 | ||
|end_of_center_position=17971384 | |end_of_center_position=17971384 | ||
| − | |entrez_id= | + | |entrez_id=109864282 |
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=RNA, 28S ribosomal N2 |
|gene_id=100008589 | |gene_id=100008589 | ||
| − | |gene_name= | + | |gene_name=RNA28SN2 |
|gene_source=HGNC:37659 | |gene_source=HGNC:37659 | ||
|gene_symbol=RNA28S5 | |gene_symbol=RNA28S5 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:37659 | |hgnc_mgi_id=HGNC:37659 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_146148 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_146148 |
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
|start=8445172 | |start=8445172 | ||
|start_of_center_position=17971383 | |start_of_center_position=17971383 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_239248.1 | |tss_id=hg_239248.1 | ||
Revision as of 15:01, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17971383 |
|---|---|
| End of the center position in the TSS region: | 17971384 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000615700.1:40 uc061yzn.1:40 |
TATA-Box annotation
| Distance to TSS: | 4032 |
|---|---|
| Nearest PromoterID: | NR_146148 |
| Entrez ID: | 109864282 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_146148 |
| Nearest Ensembl: | |
| Gene Name: | RNA28SN2 |
| Gene Alias: | - |
| Gene Description: | RNA, 28S ribosomal N2 |
| Gene Type: | rRNA |
| CpG%: | 0.11 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
