Difference between revisions of "TSS:Hg 242377.1"
From referenceTSS
| Line 3: | Line 3: | ||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=662 |
|end=102544126 | |end=102544126 | ||
|end_of_center_position=44801482 | |end_of_center_position=44801482 | ||
| − | |entrez_id= | + | |entrez_id=107983993 |
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=uroplakin 3B like 2 |
|gene_id=100271927 | |gene_id=100271927 | ||
| − | |gene_name= | + | |gene_name=UPK3BL2 |
|gene_source=HGNC:35202 | |gene_source=HGNC:35202 | ||
|gene_symbol=RASA4B | |gene_symbol=RASA4B | ||
| Line 18: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:35202 | |hgnc_mgi_id=HGNC:35202 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000284981 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001363506 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_001363506 |
| − | |nearest_unigene= | + | |nearest_unigene= |
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
|start=102544125 | |start=102544125 | ||
|start_of_center_position=44801481 | |start_of_center_position=44801481 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_242377.1 | |tss_id=hg_242377.1 | ||
Revision as of 16:14, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 44801481 |
|---|---|
| End of the center position in the TSS region: | 44801482 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000481893.1:362 uc064gnu.1:362 uc010lid.3:490 |
TATA-Box annotation
| Distance to TSS: | 662 |
|---|---|
| Nearest PromoterID: | NM_001363506 |
| Entrez ID: | 107983993 |
| Nearest Unigene: | |
| Nearest Refseq: | NM_001363506 |
| Nearest Ensembl: | ENSG00000284981 |
| Gene Name: | UPK3BL2 |
| Gene Alias: | - |
| Gene Description: | uroplakin 3B like 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
