Difference between revisions of "TSS:Hg 242678.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000648948.2:-44 NM_031466:-44 AK128755:-44 | ||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=-44 |
|distance_to_tss=17694 | |distance_to_tss=17694 | ||
|end=38359272 | |end=38359272 | ||
| Line 10: | Line 11: | ||
|gene_alias=TCRGV | |gene_alias=TCRGV | ||
|gene_description=T cell receptor gamma locus antisense RNA 1 | |gene_description=T cell receptor gamma locus antisense RNA 1 | ||
| − | |gene_name= | + | |gene_id=83696 |
| + | |gene_name=trafficking protein particle complex subunit 9 | ||
| + | |gene_source=HGNC:30832 | ||
| + | |gene_symbol=TRAPPC9 | ||
| + | |gene_synonyms=IKBKBBP KIAA1882 MRT13 NIBP T1 TRS120 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:30832 | ||
|nearest_ensembl=ENSG00000281103 | |nearest_ensembl=ENSG00000281103 | ||
|nearest_promoter_id=NR_040085 | |nearest_promoter_id=NR_040085 | ||
|nearest_refseq=NR_040085 | |nearest_refseq=NR_040085 | ||
|nearest_unigene=Hs.173034 | |nearest_unigene=Hs.173034 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=38359269 | |start=38359269 | ||
|start_of_center_position=140458534 | |start_of_center_position=140458534 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000648948.2 NM_031466 AK128755 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_242678.1 | |tss_id=hg_242678.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=Q96Q05 | ||
}} | }} | ||
Revision as of 16:21, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 140458534 |
|---|---|
| End of the center position in the TSS region: | 140458535 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000648948.2 NM_031466 AK128755 |
|---|---|
| Distance: | -44 |
| Num_trans: | 3 |
| All_trans: | ENST00000648948.2:-44 NM_031466:-44 AK128755:-44 |
TATA-Box annotation
| Distance to TSS: | 17694 |
|---|---|
| Nearest PromoterID: | NR_040085 |
| Entrez ID: | 100506776 |
| Nearest Unigene: | Hs.173034 |
| Nearest Refseq: | NR_040085 |
| Nearest Ensembl: | ENSG00000281103 |
| Gene Name: | trafficking protein particle complex subunit 9 |
| Gene Alias: | TCRGV |
| Gene Description: | T cell receptor gamma locus antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
