Difference between revisions of "TSS:Hg 242844.1"
From referenceTSS
| Line 5: | Line 5: | ||
|P450-14DM= | |P450-14DM= | ||
|P450L1= | |P450L1= | ||
| − | |all_trans= | + | |all_trans=ENST00000338368.7:-18 U34994:-18 U47077:-23 ENST00000314191.7:24 NM_001081640:24 NM_006904:24 AK296833:24 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=-18 |
| − | |distance_to_tss= | + | |distance_to_tss=64390 |
|end=92070087 | |end=92070087 | ||
|end_of_center_position=47960160 | |end_of_center_position=47960160 | ||
|entrez_id=1595 | |entrez_id=1595 | ||
|gc_percent=0.348259 | |gc_percent=0.348259 | ||
| − | |gene_alias=CP51 | + | |gene_alias=CP51{{!}}CYP51{{!}}CYPL1{{!}}LDM{{!}}P450-14DM{{!}}P450L1 |
|gene_description=cytochrome P450 family 51 subfamily A member 1 | |gene_description=cytochrome P450 family 51 subfamily A member 1 | ||
| − | |gene_id= | + | |gene_id=5591 |
| − | |gene_name= | + | |gene_name=protein kinase, DNA-activated, catalytic subunit |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:9413 |
| − | |gene_symbol= | + | |gene_symbol=PRKDC |
| − | |gene_synonyms= | + | |gene_synonyms=DNA-PKC DNA-PKcs DNAPK DNAPKc DNPK1 XRCC7 p350 p460 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:9413 |
|nearest_ensembl=ENSG00000001630 | |nearest_ensembl=ENSG00000001630 | ||
|nearest_promoter_id=NM_000786 | |nearest_promoter_id=NM_000786 | ||
|nearest_refseq=NM_000786 | |nearest_refseq=NM_000786 | ||
|nearest_unigene=Hs.417077 | |nearest_unigene=Hs.417077 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=92070086 | |start=92070086 | ||
|start_of_center_position=47960159 | |start_of_center_position=47960159 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=0(CTCTCTAAAGAG,-,0.00) |
| − | |transcript_name= | + | |transcript_name=ENST00000338368.7 U34994 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_242844.1 | |tss_id=hg_242844.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=P78527 |
}} | }} | ||
Revision as of 16:25, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 47960159 |
|---|---|
| End of the center position in the TSS region: | 47960160 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000338368.7 U34994 |
|---|---|
| Distance: | -18 |
| Num_trans: | 7 |
| All_trans: | ENST00000338368.7:-18 U34994:-18 U47077:-23 ENST00000314191.7:24 NM_001081640:24 NM_006904:24 AK296833:24 |
TATA-Box annotation
| Distance to TSS: | 64390 |
|---|---|
| Nearest PromoterID: | NM_000786 |
| Entrez ID: | 1595 |
| Nearest Unigene: | Hs.417077 |
| Nearest Refseq: | NM_000786 |
| Nearest Ensembl: | ENSG00000001630 |
| Gene Name: | protein kinase, DNA-activated, catalytic subunit |
| Gene Alias: | CP51|CYP51|CYPL1|LDM|P450-14DM|P450L1 |
| Gene Description: | cytochrome P450 family 51 subfamily A member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.348259 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 0(CTCTCTAAAGAG,-,0.00) |
