Difference between revisions of "TSS:Hg 243060.1"
From referenceTSS
| Line 3: | Line 3: | ||
|LFIRE-1= | |LFIRE-1= | ||
|LFIRE1= | |LFIRE1= | ||
| + | |all_trans=AK310776:0 BC041593:-35 ENST00000603230.1:69 AK310791:69 ENST00000265132.8:97 NM_001633:97 AK290837:97 X04225:116 AY544123:128 X04494:143 AB463406:185 HQ448440:187 KJ890666:187 CU692002:187 | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=30743 | |distance_to_tss=30743 | ||
|end=17864667 | |end=17864667 | ||
| Line 11: | Line 12: | ||
|entrez_id=2267 | |entrez_id=2267 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
| − | |gene_alias=HFREP1 | + | |gene_alias=HFREP1{{!}}HP-041{{!}}HPS{{!}}LFIRE-1{{!}}LFIRE1 |
|gene_description=fibrinogen like 1 | |gene_description=fibrinogen like 1 | ||
| − | |gene_name= | + | |gene_id=259 |
| + | |gene_name=alpha-1-microglobulin/bikunin precursor | ||
| + | |gene_source=HGNC:453 | ||
| + | |gene_symbol=AMBP | ||
| + | |gene_synonyms=EDC1 HCP HI30 IATIL ITILC UTI | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:453 | ||
|nearest_ensembl=ENSG00000104760 | |nearest_ensembl=ENSG00000104760 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_201553 |
|nearest_refseq=NM_004467 | |nearest_refseq=NM_004467 | ||
|nearest_unigene=Hs.491143 | |nearest_unigene=Hs.491143 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=17864655 | |start=17864655 | ||
|start_of_center_position=114078398 | |start_of_center_position=114078398 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK310776 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_243060.1 | |tss_id=hg_243060.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 16:30, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114078398 |
|---|---|
| End of the center position in the TSS region: | 114078399 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK310776 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | AK310776:0 BC041593:-35 ENST00000603230.1:69 AK310791:69 ENST00000265132.8:97 NM_001633:97 AK290837:97 X04225:116 AY544123:128 X04494:143 AB463406:185 HQ448440:187 KJ890666:187 CU692002:187 |
TATA-Box annotation
| Distance to TSS: | 30743 |
|---|---|
| Nearest PromoterID: | NM_201553 |
| Entrez ID: | 2267 |
| Nearest Unigene: | Hs.491143 |
| Nearest Refseq: | NM_004467 |
| Nearest Ensembl: | ENSG00000104760 |
| Gene Name: | alpha-1-microglobulin/bikunin precursor |
| Gene Alias: | HFREP1|HP-041|HPS|LFIRE-1|LFIRE1 |
| Gene Description: | fibrinogen like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
