Difference between revisions of "TSS:Hg 243097.1"
From referenceTSS
| Line 3: | Line 3: | ||
|NET34= | |NET34= | ||
|ZIP14= | |ZIP14= | ||
| + | |all_trans=AK308756:-1 ENST00000441097.1:27 ENST00000259457.8:29 NM_002799:29 GU727627:29 AK098757:29 AK314302:29 AK303460:29 D38048:32 BC008414:32 AK223356:34 BC000509:42 GQ891532:42 AK223007:45 KJ897406:46 BT007218:46 AB464089:46 CR456721:46 U44425:60 ENST00000466951.1:164 ENST00000498485.5:180 | ||
|chr=chr8 | |chr=chr8 | ||
|cig19= | |cig19= | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=-1 |
| − | |distance_to_tss= | + | |distance_to_tss=3581 |
|end=22396420 | |end=22396420 | ||
|end_of_center_position=124415472 | |end_of_center_position=124415472 | ||
|entrez_id=23516 | |entrez_id=23516 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias=HMNDYT2 | + | |gene_alias=HCIN{{!}}HMNDYT2{{!}}LZT-Hs4{{!}}NET34{{!}}ZIP14{{!}}cig19 |
|gene_description=solute carrier family 39 member 14 | |gene_description=solute carrier family 39 member 14 | ||
| − | |gene_name= | + | |gene_id=5695 |
| + | |gene_name=proteasome 20S subunit beta 7 | ||
| + | |gene_source=HGNC:9544 | ||
| + | |gene_symbol=PSMB7 | ||
| + | |gene_synonyms=Z | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9544 | ||
|nearest_ensembl=ENSG00000104635 | |nearest_ensembl=ENSG00000104635 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001351659 |
|nearest_refseq=NM_015359 | |nearest_refseq=NM_015359 | ||
|nearest_unigene=Hs.491232 | |nearest_unigene=Hs.491232 | ||
| − | |num_trans= | + | |num_trans=21 |
|species=human | |species=human | ||
|start=22396413 | |start=22396413 | ||
|start_of_center_position=124415471 | |start_of_center_position=124415471 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AK308756 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_243097.1 | |tss_id=hg_243097.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 16:30, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 124415471 |
|---|---|
| End of the center position in the TSS region: | 124415472 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK308756 |
|---|---|
| Distance: | -1 |
| Num_trans: | 21 |
| All_trans: | AK308756:-1 ENST00000441097.1:27 ENST00000259457.8:29 NM_002799:29 GU727627:29 AK098757:29 AK314302:29 AK303460:29 D38048:32 BC008414:32 AK223356:34 BC000509:42 GQ891532:42 AK223007:45 KJ897406:46 BT007218:46 AB464089:46 CR456721:46 U44425:60 ENST00000466951.1:164 ENST00000498485.5:180 |
TATA-Box annotation
| Distance to TSS: | 3581 |
|---|---|
| Nearest PromoterID: | NM_001351659 |
| Entrez ID: | 23516 |
| Nearest Unigene: | Hs.491232 |
| Nearest Refseq: | NM_015359 |
| Nearest Ensembl: | ENSG00000104635 |
| Gene Name: | proteasome 20S subunit beta 7 |
| Gene Alias: | HCIN|HMNDYT2|LZT-Hs4|NET34|ZIP14|cig19 |
| Gene Description: | solute carrier family 39 member 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
