Difference between revisions of "TSS:Hg 243163.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=BC152887:-10 BC156625:-10 BC156836:-10 AB528863:-10 ENST00000356873.7:-33 BC146961:-33 BC146946:-33 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance= | + | |distance=-10 |
|distance_to_tss=-35 | |distance_to_tss=-35 | ||
|end=39584533 | |end=39584533 | ||
| Line 9: | Line 9: | ||
|entrez_id=8749 | |entrez_id=8749 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=ADAM27 | + | |gene_alias=ADAM27{{!}}tMDCIII |
|gene_description=ADAM metallopeptidase domain 18 | |gene_description=ADAM metallopeptidase domain 18 | ||
| − | |gene_id= | + | |gene_id=642968 |
| − | |gene_name= | + | |gene_name=family with sequence similarity 163 member B |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:33277 |
| − | |gene_symbol= | + | |gene_symbol=FAM163B |
| − | |gene_synonyms= | + | |gene_synonyms= |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:33277 |
|nearest_ensembl=ENSG00000168619 | |nearest_ensembl=ENSG00000168619 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001190956 |
|nearest_refseq=NM_014237 | |nearest_refseq=NM_014237 | ||
|nearest_unigene=Hs.127930 | |nearest_unigene=Hs.127930 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=39584532 | |start=39584532 | ||
| Line 28: | Line 28: | ||
|strand=+ | |strand=+ | ||
|tMDCIII= | |tMDCIII= | ||
| − | |transcript_name= | + | |transcript_name=BC152887 BC156625 BC156836 AB528863 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_243163.1 | |tss_id=hg_243163.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 16:32, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 133580212 |
|---|---|
| End of the center position in the TSS region: | 133580213 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC152887 BC156625 BC156836 AB528863 |
|---|---|
| Distance: | -10 |
| Num_trans: | 7 |
| All_trans: | BC152887:-10 BC156625:-10 BC156836:-10 AB528863:-10 ENST00000356873.7:-33 BC146961:-33 BC146946:-33 |
TATA-Box annotation
| Distance to TSS: | -35 |
|---|---|
| Nearest PromoterID: | NM_001190956 |
| Entrez ID: | 8749 |
| Nearest Unigene: | Hs.127930 |
| Nearest Refseq: | NM_014237 |
| Nearest Ensembl: | ENSG00000168619 |
| Gene Name: | family with sequence similarity 163 member B |
| Gene Alias: | ADAM27|tMDCIII |
| Gene Description: | ADAM metallopeptidase domain 18 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
