Difference between revisions of "TSS:Hg 243174.1"
From referenceTSS
| Line 3: | Line 3: | ||
|POTE-8= | |POTE-8= | ||
|POTE8= | |POTE8= | ||
| + | |all_trans=ENST00000561457.2:-56 NM_001256526:-56 ENST00000448040.2:-63 ENST00000447934.1:101 ENST00000557985.2:-159 BC092490:-159 BC111053:-215 BC014304:-407 BC013282:-449 AK023162:-464 AK091349:-469 BC021231:-488 ENST00000418388.6:-500 NR_134506:-500 NM_152833:-500 | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=-56 |
|distance_to_tss=-21889 | |distance_to_tss=-21889 | ||
|end=43270562 | |end=43270562 | ||
| Line 11: | Line 12: | ||
|entrez_id=340441 | |entrez_id=340441 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| − | |gene_alias=A26A1 | + | |gene_alias=A26A1{{!}}CT104.3{{!}}POTE-8{{!}}POTE8 |
|gene_description=POTE ankyrin domain family member A | |gene_description=POTE ankyrin domain family member A | ||
| − | |gene_name= | + | |gene_id=90120 |
| + | |gene_name=transmembrane protein 250 | ||
| + | |gene_source=HGNC:31009 | ||
| + | |gene_symbol=TMEM250 | ||
| + | |gene_synonyms=bA83N9.1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |nearest_ensembl= | + | |hgnc_mgi_id=HGNC:31009 |
| + | |nearest_ensembl=ENSG00000188877 | ||
|nearest_promoter_id=NM_001002920 | |nearest_promoter_id=NM_001002920 | ||
|nearest_refseq=NM_001002920 | |nearest_refseq=NM_001002920 | ||
|nearest_unigene=Hs.531579 | |nearest_unigene=Hs.531579 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=human | |species=human | ||
|start=43270543 | |start=43270543 | ||
|start_of_center_position=136118374 | |start_of_center_position=136118374 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-21(CCTTTTATGTCT,+,0.00) |
| − | |transcript_name= | + | |transcript_name=ENST00000561457.2 NM_001256526 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_243174.1 | |tss_id=hg_243174.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=H0YL14 | ||
}} | }} | ||
Revision as of 16:32, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 136118374 |
|---|---|
| End of the center position in the TSS region: | 136118375 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000561457.2 NM_001256526 |
|---|---|
| Distance: | -56 |
| Num_trans: | 15 |
| All_trans: | ENST00000561457.2:-56 NM_001256526:-56 ENST00000448040.2:-63 ENST00000447934.1:101 ENST00000557985.2:-159 BC092490:-159 BC111053:-215 BC014304:-407 BC013282:-449 AK023162:-464 AK091349:-469 BC021231:-488 ENST00000418388.6:-500 NR_134506:-500 NM_152833:-500 |
TATA-Box annotation
| Distance to TSS: | -21889 |
|---|---|
| Nearest PromoterID: | NM_001002920 |
| Entrez ID: | 340441 |
| Nearest Unigene: | Hs.531579 |
| Nearest Refseq: | NM_001002920 |
| Nearest Ensembl: | ENSG00000188877 |
| Gene Name: | transmembrane protein 250 |
| Gene Alias: | A26A1|CT104.3|POTE-8|POTE8 |
| Gene Description: | POTE ankyrin domain family member A |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -21(CCTTTTATGTCT,+,0.00) |
