Difference between revisions of "TSS:Hg 243350.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC010100:116 LF355191:278 MA590768:278 ENST00000418319.5:349 LF355192:-404 MA590769:-404 BC015747:406 AK304565:439 AK293606:474 AK290860:500 | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=116 |
| − | |distance_to_tss= | + | |distance_to_tss=6149 |
|end=99887562 | |end=99887562 | ||
|end_of_center_position=81688797 | |end_of_center_position=81688797 | ||
| Line 10: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=cytochrome c oxidase subunit 6C | |gene_description=cytochrome c oxidase subunit 6C | ||
| − | |gene_name= | + | |gene_id=7088 |
| + | |gene_name=TLE family member 1, transcriptional corepressor | ||
| + | |gene_source=HGNC:11837 | ||
| + | |gene_symbol=TLE1 | ||
| + | |gene_synonyms=ESG ESG1 GRG1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11837 | ||
|nearest_ensembl=ENSG00000164919 | |nearest_ensembl=ENSG00000164919 | ||
|nearest_promoter_id=NM_004374 | |nearest_promoter_id=NM_004374 | ||
|nearest_refseq=NM_004374 | |nearest_refseq=NM_004374 | ||
|nearest_unigene=Hs.351875 | |nearest_unigene=Hs.351875 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=99887553 | |start=99887553 | ||
|start_of_center_position=81688796 | |start_of_center_position=81688796 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=BC010100 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_243350.1 | |tss_id=hg_243350.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 16:36, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 81688796 |
|---|---|
| End of the center position in the TSS region: | 81688797 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC010100 |
|---|---|
| Distance: | 116 |
| Num_trans: | 10 |
| All_trans: | BC010100:116 LF355191:278 MA590768:278 ENST00000418319.5:349 LF355192:-404 MA590769:-404 BC015747:406 AK304565:439 AK293606:474 AK290860:500 |
TATA-Box annotation
| Distance to TSS: | 6149 |
|---|---|
| Nearest PromoterID: | NM_004374 |
| Entrez ID: | 1345 |
| Nearest Unigene: | Hs.351875 |
| Nearest Refseq: | NM_004374 |
| Nearest Ensembl: | ENSG00000164919 |
| Gene Name: | TLE family member 1, transcriptional corepressor |
| Gene Alias: | - |
| Gene Description: | cytochrome c oxidase subunit 6C |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.328358 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
