Difference between revisions of "TSS:Hg 3086.1"
From referenceTSS
| Line 6: | Line 6: | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=7154 |
|end=61089717 | |end=61089717 | ||
|end_of_center_position=61089716 | |end_of_center_position=61089716 | ||
|entrez_id=4774 | |entrez_id=4774 | ||
|gc_percent=0.313433 | |gc_percent=0.313433 | ||
| − | |gene_alias=CTF | + | |gene_alias=BRMUTD{{!}}CTF{{!}}NF-I/A{{!}}NF1-A{{!}}NFI-A{{!}}NFI-L |
|gene_description=nuclear factor I A | |gene_description=nuclear factor I A | ||
|gene_name=NFIA | |gene_name=NFIA | ||
| Line 25: | Line 25: | ||
|start_of_center_position=61089715 | |start_of_center_position=61089715 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=74(GTTTTTAAAGAA,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 19:30, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 61089715 |
|---|---|
| End of the center position in the TSS region: | 61089716 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 7154 |
|---|---|
| Nearest PromoterID: | NM_001134673 |
| Entrez ID: | 4774 |
| Nearest Unigene: | Hs.740757 |
| Nearest Refseq: | NM_005595 |
| Nearest Ensembl: | ENSG00000162599 |
| Gene Name: | NFIA |
| Gene Alias: | BRMUTD|CTF|NF-I/A|NF1-A|NFI-A|NFI-L |
| Gene Description: | nuclear factor I A |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.313433 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 74(GTTTTTAAAGAA,+,0.00) |
