Difference between revisions of "TSS:Hg 35992.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK057559:-26 ENST00000428373.5:-141 uc003cfz.5:-141 BC041385:-141 |chr=chr3 |cpg_percent=0.05 |distance=-26 |distance_to_tss=562 |end=35639742 |entrez_i...") |
|||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK057559:-26 ENST00000428373.5:-141 | + | |R3HDM3= |
| + | |RCS= | ||
| + | |TARPP= | ||
| + | |all_trans=AK057559:-26 ENST00000428373.5:-141 BC041385:-141 NM_001267616:-205 NM_001267619:-205 NM_001385491:-205 NM_001385492:-205 NM_001385495:-205 NM_001385496:-205 NM_001385497:-205 NM_001385517:-205 NM_001385536:-205 NM_001385555:-205 NM_001385556:-205 NM_001385558:-205 NM_001385561:-205 NM_001385562:-205 NM_001385563:-205 NM_001385564:-205 NR_169632:-205 NR_169633:-205 NR_169635:-205 NR_169644:-205 NR_169645:-205 NR_169647:-205 | ||
|chr=chr3 | |chr=chr3 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance=-26 | |distance=-26 | ||
| − | |distance_to_tss= | + | |distance_to_tss=211 |
|end=35639742 | |end=35639742 | ||
| + | |end_of_center_position=35639736 | ||
|entrez_id=10777 | |entrez_id=10777 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=ARPP-21 | + | |gene_alias=ARPP-21{{!}}R3HDM3{{!}}RCS{{!}}TARPP |
|gene_description=cAMP regulated phosphoprotein 21 | |gene_description=cAMP regulated phosphoprotein 21 | ||
|gene_id=100130503 | |gene_id=100130503 | ||
| − | |gene_name= | + | |gene_name=ARPP21 |
|gene_source=EntrezGene:100130503 | |gene_source=EntrezGene:100130503 | ||
|gene_symbol=LOC100130503 | |gene_symbol=LOC100130503 | ||
| Line 21: | Line 25: | ||
|nearest_refseq=NM_016300 | |nearest_refseq=NM_016300 | ||
|nearest_unigene=Hs.475902 | |nearest_unigene=Hs.475902 | ||
| − | |num_trans= | + | |num_trans=25 |
|species=human | |species=human | ||
|start=35639729 | |start=35639729 | ||
| + | |start_of_center_position=35639735 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK057559 | |transcript_name=AK057559 | ||
Latest revision as of 21:27, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35639735 |
|---|---|
| End of the center position in the TSS region: | 35639736 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK057559 |
|---|---|
| Distance: | -26 |
| Num_trans: | 25 |
| All_trans: | AK057559:-26 ENST00000428373.5:-141 BC041385:-141 NM_001267616:-205 NM_001267619:-205 NM_001385491:-205 NM_001385492:-205 NM_001385495:-205 NM_001385496:-205 NM_001385497:-205 NM_001385517:-205 NM_001385536:-205 NM_001385555:-205 NM_001385556:-205 NM_001385558:-205 NM_001385561:-205 NM_001385562:-205 NM_001385563:-205 NM_001385564:-205 NR_169632:-205 NR_169633:-205 NR_169635:-205 NR_169644:-205 NR_169645:-205 NR_169647:-205 |
TATA-Box annotation
| Distance to TSS: | 211 |
|---|---|
| Nearest PromoterID: | NM_001267616 |
| Entrez ID: | 10777 |
| Nearest Unigene: | Hs.475902 |
| Nearest Refseq: | NM_016300 |
| Nearest Ensembl: | ENSG00000172995 |
| Gene Name: | ARPP21 |
| Gene Alias: | ARPP-21|R3HDM3|RCS|TARPP |
| Gene Description: | cAMP regulated phosphoprotein 21 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
