Difference between revisions of "TSS:Hg 4077.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000390220. | + | |all_trans=ENST00000390220.3:41 NR_030621:41 LG052093:41 LY480928:41 LY496102:41 LY496546:41 LY497808:41 LY499361:41 LY500702:41 MS869267:41 MS869621:41 MS880676:41 MS994554:41 MS996874:41 MA806183:41 MA822818:41 MA403160:53 LY481033:88 LY496117:88 LY496782:88 LY498010:88 LY499653:88 LY500902:88 MS869282:88 MS869821:88 MS880968:88 MS994790:88 MS997076:88 MA806449:88 MA823149:88 LF137617:89 LF161712:89 LF162582:89 LF644474:89 LF953334:89 LG005679:89 LG053375:89 LG240614:89 LP726959:89 LP819229:89 LP939171:89 LQ072835:89 LQ441001:89 LQ724561:89 LV470699:89 LY405572:89 LY480805:89 LY496089:89 LY496334:89 LY497628:89 LY499084:89 LY500515:89 LZ234262:89 MA260811:89 MA405944:89 MA646336:89 MA734220:89 MS673627:89 MS833920:89 MS869254:89 MS869434:89 MS880399:89 MS902058:89 MS994342:89 MS996694:89 MA803389:89 MA805906:89 MA822483:89 MP129389:89 MP162312:89 MB420697:89 ENST00000565336.1:383 BC041977:385 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| − | |distance= | + | |distance=41 |
|distance_to_tss=-80 | |distance_to_tss=-80 | ||
|end=93846791 | |end=93846791 | ||
| Line 9: | Line 9: | ||
|entrez_id=100126348 | |entrez_id=100126348 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias=MIRN760 | + | |gene_alias=MIRN760{{!}}hsa-mir-760{{!}}mir-760 |
|gene_description=microRNA 760 | |gene_description=microRNA 760 | ||
|gene_id=100126348 | |gene_id=100126348 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NR_030621 | |nearest_refseq=NR_030621 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=73 |
|species=human | |species=human | ||
|start=93846713 | |start=93846713 | ||
|start_of_center_position=93846752 | |start_of_center_position=93846752 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000390220. | + | |transcript_name=ENST00000390220.3 NR_030621 LG052093 LY480928 LY496102 LY496546 LY497808 LY499361 LY500702 MS869267 MS869621 MS880676 MS994554 MS996874 MA806183 MA822818 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_4077.1 | |tss_id=hg_4077.1 | ||
Revision as of 23:18, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 93846752 |
|---|---|
| End of the center position in the TSS region: | 93846753 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000390220.3 NR_030621 LG052093 LY480928 LY496102 LY496546 LY497808 LY499361 LY500702 MS869267 MS869621 MS880676 MS994554 MS996874 MA806183 MA822818 |
|---|---|
| Distance: | 41 |
| Num_trans: | 73 |
| All_trans: | ENST00000390220.3:41 NR_030621:41 LG052093:41 LY480928:41 LY496102:41 LY496546:41 LY497808:41 LY499361:41 LY500702:41 MS869267:41 MS869621:41 MS880676:41 MS994554:41 MS996874:41 MA806183:41 MA822818:41 MA403160:53 LY481033:88 LY496117:88 LY496782:88 LY498010:88 LY499653:88 LY500902:88 MS869282:88 MS869821:88 MS880968:88 MS994790:88 MS997076:88 MA806449:88 MA823149:88 LF137617:89 LF161712:89 LF162582:89 LF644474:89 LF953334:89 LG005679:89 LG053375:89 LG240614:89 LP726959:89 LP819229:89 LP939171:89 LQ072835:89 LQ441001:89 LQ724561:89 LV470699:89 LY405572:89 LY480805:89 LY496089:89 LY496334:89 LY497628:89 LY499084:89 LY500515:89 LZ234262:89 MA260811:89 MA405944:89 MA646336:89 MA734220:89 MS673627:89 MS833920:89 MS869254:89 MS869434:89 MS880399:89 MS902058:89 MS994342:89 MS996694:89 MA803389:89 MA805906:89 MA822483:89 MP129389:89 MP162312:89 MB420697:89 ENST00000565336.1:383 BC041977:385 |
TATA-Box annotation
| Distance to TSS: | -80 |
|---|---|
| Nearest PromoterID: | NR_030621 |
| Entrez ID: | 100126348 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_030621 |
| Nearest Ensembl: | ENSG00000211575 |
| Gene Name: | microRNA 760 |
| Gene Alias: | MIRN760|hsa-mir-760|mir-760 |
| Gene Description: | microRNA 760 |
| Gene Type: | ncRNA |
| CpG%: | 0.14 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
