Difference between revisions of "TSS:Hg 65813.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NM_001100829: | + | |all_trans=ENST00000379426.2:-64 NM_001100829:-64 LF209763:155 MA445340:155 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| − | |distance= | + | |distance=-64 |
| − | |distance_to_tss= | + | |distance_to_tss=70 |
|end=11537825 | |end=11537825 | ||
|end_of_center_position=11537819 | |end_of_center_position=11537819 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001100829 | |nearest_refseq=NM_001100829 | ||
|nearest_unigene=Hs.146317 | |nearest_unigene=Hs.146317 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=11537812 | |start=11537812 | ||
|start_of_center_position=11537818 | |start_of_center_position=11537818 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_001100829 | + | |transcript_name=ENST00000379426.2 NM_001100829 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_65813.1 | |tss_id=hg_65813.1 | ||
Revision as of 09:00, 18 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 11537818 |
|---|---|
| End of the center position in the TSS region: | 11537819 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000379426.2 NM_001100829 |
|---|---|
| Distance: | -64 |
| Num_trans: | 4 |
| All_trans: | ENST00000379426.2:-64 NM_001100829:-64 LF209763:155 MA445340:155 |
TATA-Box annotation
| Distance to TSS: | 70 |
|---|---|
| Nearest PromoterID: | NM_001100829 |
| Entrez ID: | 100113407 |
| Nearest Unigene: | Hs.146317 |
| Nearest Refseq: | NM_001100829 |
| Nearest Ensembl: | ENSG00000205269 |
| Gene Name: | transmembrane protein 170B |
| Gene Alias: | - |
| Gene Description: | transmembrane protein 170B |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
