Difference between revisions of "TSS:Hg 76873.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000437419.5:0 ENST00000438961.1:0 ENST00000440747.5 | + | |all_trans=ENST00000437419.5:0 ENST00000438961.1:0 ENST00000440747.5:0 AK056233:0 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=32 |
|end=727285 | |end=727285 | ||
|end_of_center_position=727250 | |end_of_center_position=727250 | ||
| Line 12: | Line 12: | ||
|gene_description=protein kinase cAMP-dependent type I regulatory subunit beta | |gene_description=protein kinase cAMP-dependent type I regulatory subunit beta | ||
|gene_id=54919 | |gene_id=54919 | ||
| − | |gene_name=dynein | + | |gene_name=dynein axonemal assembly factor 5 |
|gene_source=HGNC:26013 | |gene_source=HGNC:26013 | ||
|gene_symbol=DNAAF5 | |gene_symbol=DNAAF5 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_002735 | |nearest_refseq=NM_002735 | ||
|nearest_unigene=Hs.520851 | |nearest_unigene=Hs.520851 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=727213 | |start=727213 | ||
|start_of_center_position=727249 | |start_of_center_position=727249 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000437419.5 ENST00000438961.1 ENST00000440747.5 | + | |transcript_name=ENST00000437419.5 ENST00000438961.1 ENST00000440747.5 AK056233 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_76873.1 | |tss_id=hg_76873.1 | ||
Revision as of 13:19, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 727249 |
|---|---|
| End of the center position in the TSS region: | 727250 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000437419.5 ENST00000438961.1 ENST00000440747.5 AK056233 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENST00000437419.5:0 ENST00000438961.1:0 ENST00000440747.5:0 AK056233:0 |
TATA-Box annotation
| Distance to TSS: | 32 |
|---|---|
| Nearest PromoterID: | NM_001164760 |
| Entrez ID: | 5575 |
| Nearest Unigene: | Hs.520851 |
| Nearest Refseq: | NM_002735 |
| Nearest Ensembl: | ENSG00000188191 |
| Gene Name: | dynein axonemal assembly factor 5 |
| Gene Alias: | PRKAR1 |
| Gene Description: | protein kinase cAMP-dependent type I regulatory subunit beta |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
