Difference between revisions of "TSS:Hg 79500.1"
From referenceTSS
| Line 9: | Line 9: | ||
|PRKA9= | |PRKA9= | ||
|YOTIAO= | |YOTIAO= | ||
| − | |all_trans=ENST00000356239. | + | |all_trans=ENST00000680534.1:0 ENST00000680513.1:0 ENST00000680072.1:0 ENST00000679554.1:13 ENST00000679821.1:13 ENST00000681722.1:15 ENST00000680181.1:15 ENST00000356239.8:15 ENST00000679521.1:15 NM_005751:15 NM_147185:15 ENST00000680074.1:31 ENST00000679722.1:31 ENST00000679457.1:31 ENST00000679474.1:31 ENST00000680952.1:31 ENST00000680047.1:31 ENST00000681412.1:31 ENST00000679448.1:31 ENST00000680766.1:31 AJ131693:31 ENST00000493453.1:69 AF026245:69 ENST00000394564.5:79 BC015533:79 AB019691:167 AY803272:208 ENST00000674381.2:232 KJ902063:250 BC172915:251 CU677341:252 ENST00000359028.7:253 AF247727:253 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss=- | + | |distance_to_tss=-20 |
|end=91940847 | |end=91940847 | ||
|end_of_center_position=91940842 | |end_of_center_position=91940842 | ||
|entrez_id=10142 | |entrez_id=10142 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=AKAP-9 | + | |gene_alias=AKAP-9{{!}}AKAP350{{!}}AKAP450{{!}}CG-NAP{{!}}HYPERION{{!}}LQT11{{!}}MU-RMS-40.16A{{!}}PPP1R45{{!}}PRKA9{{!}}YOTIAO |
|gene_description=A-kinase anchoring protein 9 | |gene_description=A-kinase anchoring protein 9 | ||
|gene_id=10142 | |gene_id=10142 | ||
| Line 31: | Line 31: | ||
|nearest_refseq=NM_005751 | |nearest_refseq=NM_005751 | ||
|nearest_unigene=Hs.651221 | |nearest_unigene=Hs.651221 | ||
| − | |num_trans= | + | |num_trans=33 |
|species=human | |species=human | ||
|start=91940836 | |start=91940836 | ||
|start_of_center_position=91940841 | |start_of_center_position=91940841 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000680534.1 ENST00000680513.1 ENST00000680072.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_79500.1 | |tss_id=hg_79500.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 14:20, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 91940841 |
|---|---|
| End of the center position in the TSS region: | 91940842 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000680534.1 ENST00000680513.1 ENST00000680072.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 33 |
| All_trans: | ENST00000680534.1:0 ENST00000680513.1:0 ENST00000680072.1:0 ENST00000679554.1:13 ENST00000679821.1:13 ENST00000681722.1:15 ENST00000680181.1:15 ENST00000356239.8:15 ENST00000679521.1:15 NM_005751:15 NM_147185:15 ENST00000680074.1:31 ENST00000679722.1:31 ENST00000679457.1:31 ENST00000679474.1:31 ENST00000680952.1:31 ENST00000680047.1:31 ENST00000681412.1:31 ENST00000679448.1:31 ENST00000680766.1:31 AJ131693:31 ENST00000493453.1:69 AF026245:69 ENST00000394564.5:79 BC015533:79 AB019691:167 AY803272:208 ENST00000674381.2:232 KJ902063:250 BC172915:251 CU677341:252 ENST00000359028.7:253 AF247727:253 |
TATA-Box annotation
| Distance to TSS: | -20 |
|---|---|
| Nearest PromoterID: | NM_147185 |
| Entrez ID: | 10142 |
| Nearest Unigene: | Hs.651221 |
| Nearest Refseq: | NM_005751 |
| Nearest Ensembl: | ENSG00000127914 |
| Gene Name: | A-kinase anchoring protein 9 |
| Gene Alias: | AKAP-9|AKAP350|AKAP450|CG-NAP|HYPERION|LQT11|MU-RMS-40.16A|PPP1R45|PRKA9|YOTIAO |
| Gene Description: | A-kinase anchoring protein 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
