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Difference between revisions of "TSS:Hg 82383.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|GCS1L=
 
|GCS1L=
|all_trans=AK300644:0 AK300859:0 ENST00000617043.4:-7 ENST00000437486.5:-7 NM_001284311:-7 uc011jvs.4:-7 uc064avb.1:-7
+
|all_trans=AK300644:0 AK300859:0 ENST00000617043.4:-7 ENST00000437486.5:-7 NM_001284311:-7
 
|chr=chr7
 
|chr=chr7
 
|cpg_percent=0.05
 
|cpg_percent=0.05
Line 10: Line 10:
 
|entrez_id=11033
 
|entrez_id=11033
 
|gc_percent=0.606965
 
|gc_percent=0.606965
|gene_alias=CENTA1
+
|gene_alias=CENTA1{{!}}GCS1L{{!}}p42IP4
 
|gene_description=ArfGAP with dual PH domains 1
 
|gene_description=ArfGAP with dual PH domains 1
 
|gene_id=11033
 
|gene_id=11033
Line 23: Line 23:
 
|nearest_refseq=NM_006869
 
|nearest_refseq=NM_006869
 
|nearest_unigene=Hs.602573
 
|nearest_unigene=Hs.602573
|num_trans=7
+
|num_trans=5
 
|p42IP4=
 
|p42IP4=
 
|species=human
 
|species=human

Revision as of 15:27, 18 June 2021

Basic information about the TSS


TSS ID:hg_82383.1
Species:human
Chr:chr7
TSS Classification:yes
Start:920870
End:920882
Strand:-
TSS Score:1
Start of the center position in the TSS region:920876
End of the center position in the TSS region:920877



Gene and protein annotation


Transcript_name:AK300644 AK300859
Distance:0
GeneID:11033
HGNC/MGI_ID:HGNC:16486
UniProt_ID:B4DUH0 B4DUZ7
Gene_name:ArfGAP with dual PH domains 1
Gene_symbol:ADAP1
Gene_synonyms:GCS1L
Gene_source:HGNC:16486



Transcript annotation


Transcript_name:AK300644 AK300859
Distance:0
Num_trans:5
All_trans:AK300644:0 AK300859:0 ENST00000617043.4:-7 ENST00000437486.5:-7 NM_001284311:-7



TATA-Box annotation


Distance to TSS:13
Nearest PromoterID:NM_001284311
Entrez ID:11033
Nearest Unigene:Hs.602573
Nearest Refseq:NM_006869
Nearest Ensembl:ENSG00000105963
Gene Name:ArfGAP with dual PH domains 1
Gene Alias:CENTA1|GCS1L|p42IP4
Gene Description:ArfGAP with dual PH domains 1
Gene Type:protein-coding
CpG%:0.05
GC%:0.606965
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):