Difference between revisions of "TSS:Hg 82816.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK294572:-57 AK311707:-57 CR627389:79 ENST00000443608.5 | + | |all_trans=AK294572:-57 AK311707:-57 CR627389:79 ENST00000443608.5:-86 AK316007:-86 ENST00000438956.5:-97 AK299693:-97 AK311134:102 AK311194:102 AK293802:146 ENST00000420159.6:-159 ENST00000399357.7:-159 ENST00000403527.5:-159 NM_001163150:-159 NM_001163152:-159 NM_001163151:-159 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 12: | Line 12: | ||
|gene_description=ETS variant 1 | |gene_description=ETS variant 1 | ||
|gene_id=2115 | |gene_id=2115 | ||
| − | |gene_name=ETS variant 1 | + | |gene_name=ETS variant transcription factor 1 |
|gene_source=HGNC:3490 | |gene_source=HGNC:3490 | ||
|gene_symbol=ETV1 | |gene_symbol=ETV1 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:3490 | |hgnc_mgi_id=HGNC:3490 | ||
|nearest_ensembl=ENSG00000006468 | |nearest_ensembl=ENSG00000006468 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001163152 |
|nearest_refseq=NM_004956 | |nearest_refseq=NM_004956 | ||
|nearest_unigene=Hs.22634 | |nearest_unigene=Hs.22634 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=13986347 | |start=13986347 | ||
Revision as of 15:37, 18 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 13986351 |
|---|---|
| End of the center position in the TSS region: | 13986352 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK294572 AK311707 |
|---|---|
| Distance: | -57 |
| Num_trans: | 16 |
| All_trans: | AK294572:-57 AK311707:-57 CR627389:79 ENST00000443608.5:-86 AK316007:-86 ENST00000438956.5:-97 AK299693:-97 AK311134:102 AK311194:102 AK293802:146 ENST00000420159.6:-159 ENST00000399357.7:-159 ENST00000403527.5:-159 NM_001163150:-159 NM_001163152:-159 NM_001163151:-159 |
TATA-Box annotation
| Distance to TSS: | 163 |
|---|---|
| Nearest PromoterID: | NM_001163152 |
| Entrez ID: | 2115 |
| Nearest Unigene: | Hs.22634 |
| Nearest Refseq: | NM_004956 |
| Nearest Ensembl: | ENSG00000006468 |
| Gene Name: | ETS variant transcription factor 1 |
| Gene Alias: | ER81 |
| Gene Description: | ETS variant 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
