Difference between revisions of "TSS:Hg 87732.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000306385.9:5 uc003xbg.5:5 ENST00000397814.7:409 ENST00000354870.5:409 NM_001199:409 NM_006129:409 NR_033404:409 NR_033403:409 uc064kyi.1:409 uc06...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |PCOLC= |
| + | |PCP= | ||
| + | |PCP2= | ||
| + | |TLD= | ||
| + | |all_trans=LF212583:-1 MA448160:-1 LF210146:-161 MA445723:-161 ENST00000397814.7:409 ENST00000354870.5:409 ENST00000520970.5:456 AB209590:456 | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| − | |distance= | + | |distance=-1 |
| − | |distance_to_tss=- | + | |distance_to_tss=-651 |
|end=22164731 | |end=22164731 | ||
| + | |end_of_center_position=22164721 | ||
|entrez_id=649 | |entrez_id=649 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias=OI13 | + | |gene_alias=OI13{{!}}PCOLC{{!}}PCP{{!}}PCP2{{!}}TLD |
|gene_description=bone morphogenetic protein 1 | |gene_description=bone morphogenetic protein 1 | ||
|gene_id=649 | |gene_id=649 | ||
| − | |gene_name= | + | |gene_name=BMP1 |
|gene_source=HGNC:1067 | |gene_source=HGNC:1067 | ||
|gene_symbol=BMP1 | |gene_symbol=BMP1 | ||
| Line 21: | Line 26: | ||
|nearest_refseq=NM_001199 | |nearest_refseq=NM_001199 | ||
|nearest_unigene=Hs.1274 | |nearest_unigene=Hs.1274 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=22164710 | |start=22164710 | ||
| + | |start_of_center_position=22164720 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF212583 MA448160 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_87732.1 | |tss_id=hg_87732.1 | ||
Latest revision as of 17:31, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 22164720 |
|---|---|
| End of the center position in the TSS region: | 22164721 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF212583 MA448160 |
|---|---|
| Distance: | -1 |
| Num_trans: | 8 |
| All_trans: | LF212583:-1 MA448160:-1 LF210146:-161 MA445723:-161 ENST00000397814.7:409 ENST00000354870.5:409 ENST00000520970.5:456 AB209590:456 |
TATA-Box annotation
| Distance to TSS: | -651 |
|---|---|
| Nearest PromoterID: | NM_006129 |
| Entrez ID: | 649 |
| Nearest Unigene: | Hs.1274 |
| Nearest Refseq: | NM_001199 |
| Nearest Ensembl: | ENSG00000168487 |
| Gene Name: | BMP1 |
| Gene Alias: | OI13|PCOLC|PCP|PCP2|TLD |
| Gene Description: | bone morphogenetic protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
