Difference between revisions of "TSS:Hg 92033.1"
From referenceTSS
| Line 4: | Line 4: | ||
|MP44= | |MP44= | ||
|MTSG1= | |MTSG1= | ||
| − | |all_trans=FJ458441:81 FJ458440:-127 ENST00000381869.5:171 ENST00000523718.5:171 NM_001001925:171 NM_001001924 | + | |all_trans=NM_001363057:0 NM_001363060:0 FJ458441:81 NM_001363059:-122 NM_001363058:-122 NM_001363062:-122 NR_156437:-122 FJ458440:-127 LF213941:-136 MA449518:-136 LF208094:-137 MA443671:-137 ENST00000381869.5:171 ENST00000523718.5:171 NM_001001925:171 NM_001001924:171 AK310871:171 AY363099:211 ENST00000262102.10:420 BC136320:420 BC171765:420 FJ458439:-449 NM_001363061:-477 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss=- | + | |distance_to_tss=-1 |
|end=17801102 | |end=17801102 | ||
|end_of_center_position=17801095 | |end_of_center_position=17801095 | ||
|entrez_id=57509 | |entrez_id=57509 | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
| − | |gene_alias=ATBP | + | |gene_alias=ATBP{{!}}ATIP{{!}}ATIP3{{!}}ICIS{{!}}MP44{{!}}MTSG1 |
| − | |gene_description=microtubule associated | + | |gene_description=microtubule associated scaffold protein 1 |
|gene_id=57509 | |gene_id=57509 | ||
| − | |gene_name=microtubule associated | + | |gene_name=microtubule associated scaffold protein 1 |
|gene_source=HGNC:29789 | |gene_source=HGNC:29789 | ||
|gene_symbol=MTUS1 | |gene_symbol=MTUS1 | ||
| − | |gene_synonyms=ATBP ATIP1 DKFZp586D1519 FLJ14295 ICIS KIAA1288 MP44 MTSG1 | + | |gene_synonyms=ATBP ATIP1 ATIP3 DKFZp586D1519 FLJ14295 ICIS KIAA1288 MP44 MTSG1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:29789 | |hgnc_mgi_id=HGNC:29789 | ||
|nearest_ensembl=ENSG00000129422 | |nearest_ensembl=ENSG00000129422 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001363060 |
|nearest_refseq=NM_020749 | |nearest_refseq=NM_020749 | ||
|nearest_unigene=Hs.7946 | |nearest_unigene=Hs.7946 | ||
| − | |num_trans= | + | |num_trans=23 |
|species=human | |species=human | ||
|start=17801087 | |start=17801087 | ||
|start_of_center_position=17801094 | |start_of_center_position=17801094 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_001363057 NM_001363060 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_92033.1 | |tss_id=hg_92033.1 | ||
Revision as of 19:11, 18 June 2021
Basic information about the TSS
|
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| Start of the center position in the TSS region: | 17801094 |
|---|---|
| End of the center position in the TSS region: | 17801095 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_001363057 NM_001363060 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23 |
| All_trans: | NM_001363057:0 NM_001363060:0 FJ458441:81 NM_001363059:-122 NM_001363058:-122 NM_001363062:-122 NR_156437:-122 FJ458440:-127 LF213941:-136 MA449518:-136 LF208094:-137 MA443671:-137 ENST00000381869.5:171 ENST00000523718.5:171 NM_001001925:171 NM_001001924:171 AK310871:171 AY363099:211 ENST00000262102.10:420 BC136320:420 BC171765:420 FJ458439:-449 NM_001363061:-477 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001363060 |
| Entrez ID: | 57509 |
| Nearest Unigene: | Hs.7946 |
| Nearest Refseq: | NM_020749 |
| Nearest Ensembl: | ENSG00000129422 |
| Gene Name: | microtubule associated scaffold protein 1 |
| Gene Alias: | ATBP|ATIP|ATIP3|ICIS|MP44|MTSG1 |
| Gene Description: | microtubule associated scaffold protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
