Difference between revisions of "TSS:Hg 92037.1"
From referenceTSS
| Line 4: | Line 4: | ||
|MP44= | |MP44= | ||
|MTSG1= | |MTSG1= | ||
| − | |all_trans=FJ458440:0 FJ458441:206 FJ458439:-294 ENST00000381869.5:296 ENST00000523718.5:296 NM_001001925:296 NM_001001924:296 | + | |all_trans=NM_001363059:0 NM_001363058:0 NM_001363062:0 NR_156437:0 LF208094:0 MA443671:0 LF213941:0 MA449518:0 FJ458440:0 NM_001363057:119 NM_001363060:119 FJ458441:206 FJ458439:-294 ENST00000381869.5:296 ENST00000523718.5:296 NM_001001925:296 NM_001001924:296 AK310871:296 NM_001363061:-322 AY363099:336 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-11 |
|end=17801257 | |end=17801257 | ||
|end_of_center_position=17801235 | |end_of_center_position=17801235 | ||
|entrez_id=57509 | |entrez_id=57509 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
| − | |gene_alias=ATBP | + | |gene_alias=ATBP{{!}}ATIP{{!}}ATIP3{{!}}ICIS{{!}}MP44{{!}}MTSG1 |
| − | |gene_description=microtubule associated | + | |gene_description=microtubule associated scaffold protein 1 |
|gene_id=57509 | |gene_id=57509 | ||
| − | |gene_name=microtubule associated | + | |gene_name=microtubule associated scaffold protein 1 |
|gene_source=HGNC:29789 | |gene_source=HGNC:29789 | ||
|gene_symbol=MTUS1 | |gene_symbol=MTUS1 | ||
| − | |gene_synonyms=ATBP ATIP1 DKFZp586D1519 FLJ14295 ICIS KIAA1288 MP44 MTSG1 | + | |gene_synonyms=ATBP ATIP1 ATIP3 DKFZp586D1519 FLJ14295 ICIS KIAA1288 MP44 MTSG1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:29789 | |hgnc_mgi_id=HGNC:29789 | ||
|nearest_ensembl=ENSG00000129422 | |nearest_ensembl=ENSG00000129422 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_156437 |
|nearest_refseq=NM_020749 | |nearest_refseq=NM_020749 | ||
|nearest_unigene=Hs.7946 | |nearest_unigene=Hs.7946 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=17801212 | |start=17801212 | ||
|start_of_center_position=17801234 | |start_of_center_position=17801234 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=FJ458440 | + | |transcript_name=NM_001363059 NM_001363058 NM_001363062 NR_156437 LF208094 MA443671 LF213941 MA449518 FJ458440 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_92037.1 | |tss_id=hg_92037.1 | ||
Revision as of 19:11, 18 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 17801234 |
|---|---|
| End of the center position in the TSS region: | 17801235 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001363059 NM_001363058 NM_001363062 NR_156437 LF208094 MA443671 LF213941 MA449518 FJ458440 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | NM_001363059:0 NM_001363058:0 NM_001363062:0 NR_156437:0 LF208094:0 MA443671:0 LF213941:0 MA449518:0 FJ458440:0 NM_001363057:119 NM_001363060:119 FJ458441:206 FJ458439:-294 ENST00000381869.5:296 ENST00000523718.5:296 NM_001001925:296 NM_001001924:296 AK310871:296 NM_001363061:-322 AY363099:336 |
TATA-Box annotation
| Distance to TSS: | -11 |
|---|---|
| Nearest PromoterID: | NR_156437 |
| Entrez ID: | 57509 |
| Nearest Unigene: | Hs.7946 |
| Nearest Refseq: | NM_020749 |
| Nearest Ensembl: | ENSG00000129422 |
| Gene Name: | microtubule associated scaffold protein 1 |
| Gene Alias: | ATBP|ATIP|ATIP3|ICIS|MP44|MTSG1 |
| Gene Description: | microtubule associated scaffold protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
