Difference between revisions of "TSS:Hg 92914.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000518717 | + | |all_trans=ENST00000518717.1:-1 ENST00000521455.1:-155 ENST00000523340.1:-450 ENST00000520179.5:-459 NM_001257181:-459 AK314774:-459 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
|distance=-1 | |distance=-1 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-100 |
|end=42541053 | |end=42541053 | ||
|end_of_center_position=42541048 | |end_of_center_position=42541048 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_138436 | |nearest_refseq=NM_138436 | ||
|nearest_unigene=Hs.655320 | |nearest_unigene=Hs.655320 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=42541042 | |start=42541042 | ||
|start_of_center_position=42541047 | |start_of_center_position=42541047 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000518717 | + | |transcript_name=ENST00000518717.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_92914.1 | |tss_id=hg_92914.1 | ||
Revision as of 19:32, 18 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 42541047 |
|---|---|
| End of the center position in the TSS region: | 42541048 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000518717.1 |
|---|---|
| Distance: | -1 |
| Num_trans: | 6 |
| All_trans: | ENST00000518717.1:-1 ENST00000521455.1:-155 ENST00000523340.1:-450 ENST00000520179.5:-459 NM_001257181:-459 AK314774:-459 |
TATA-Box annotation
| Distance to TSS: | -100 |
|---|---|
| Nearest PromoterID: | NM_001135676 |
| Entrez ID: | 114926 |
| Nearest Unigene: | Hs.655320 |
| Nearest Refseq: | NM_138436 |
| Nearest Ensembl: | ENSG00000176209 |
| Gene Name: | solute carrier family 20 member 2 |
| Gene Alias: | C8orf40 |
| Gene Description: | small integral membrane protein 19 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
