Difference between revisions of "TSS:Hg 94817.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000518964.5 | + | |all_trans=ENST00000518964.5:-17 NR_038447:29 NR_038446:29 ENST00000500989.2:37 BX648371:37 ENST00000661778.1:61 ENST00000662179.1:61 ENST00000651667.1:76 ENST00000517869.2:76 ENST00000522865.5:76 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:45133 | |hgnc_mgi_id=HGNC:45133 | ||
|nearest_ensembl=ENSG00000245164 | |nearest_ensembl=ENSG00000245164 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_038447 |
|nearest_refseq=NR_038446 | |nearest_refseq=NR_038446 | ||
|nearest_unigene=Hs.729642 | |nearest_unigene=Hs.729642 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=125951225 | |start=125951225 | ||
|start_of_center_position=125951228 | |start_of_center_position=125951228 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000518964.5 | + | |transcript_name=ENST00000518964.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_94817.1 | |tss_id=hg_94817.1 | ||
Revision as of 20:16, 18 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 125951228 |
|---|---|
| End of the center position in the TSS region: | 125951229 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000518964.5 |
|---|---|
| Distance: | -17 |
| Num_trans: | 10 |
| All_trans: | ENST00000518964.5:-17 NR_038447:29 NR_038446:29 ENST00000500989.2:37 BX648371:37 ENST00000661778.1:61 ENST00000662179.1:61 ENST00000651667.1:76 ENST00000517869.2:76 ENST00000522865.5:76 |
TATA-Box annotation
| Distance to TSS: | -32 |
|---|---|
| Nearest PromoterID: | NR_038447 |
| Entrez ID: | 100130231 |
| Nearest Unigene: | Hs.729642 |
| Nearest Refseq: | NR_038446 |
| Nearest Ensembl: | ENSG00000245164 |
| Gene Name: | long intergenic non-protein coding RNA 861 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 861 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
