Difference between revisions of "TSS:Hg 95316.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000524162.5 | + | |all_trans=ENST00000524162.5:-14 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 12: | Line 12: | ||
|gene_description=paternally expressed 13 | |gene_description=paternally expressed 13 | ||
|gene_id=83696 | |gene_id=83696 | ||
| − | |gene_name=trafficking protein particle complex 9 | + | |gene_name=trafficking protein particle complex subunit 9 |
|gene_source=HGNC:30832 | |gene_source=HGNC:30832 | ||
|gene_symbol=TRAPPC9 | |gene_symbol=TRAPPC9 | ||
| Line 18: | Line 18: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:30832 | |hgnc_mgi_id=HGNC:30832 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000282164 |
|nearest_promoter_id=NR_144431 | |nearest_promoter_id=NR_144431 | ||
|nearest_refseq=NR_144431 | |nearest_refseq=NR_144431 | ||
|nearest_unigene=Hs.26814 | |nearest_unigene=Hs.26814 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=140008567 | |start=140008567 | ||
|start_of_center_position=140008572 | |start_of_center_position=140008572 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000524162.5 | + | |transcript_name=ENST00000524162.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_95316.1 | |tss_id=hg_95316.1 | ||
Revision as of 20:27, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 140008572 |
|---|---|
| End of the center position in the TSS region: | 140008573 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000524162.5 |
|---|---|
| Distance: | -14 |
| Num_trans: | 1 |
| All_trans: | ENST00000524162.5:-14 |
TATA-Box annotation
| Distance to TSS: | 91963 |
|---|---|
| Nearest PromoterID: | NR_144431 |
| Entrez ID: | 359809 |
| Nearest Unigene: | Hs.26814 |
| Nearest Refseq: | NR_144431 |
| Nearest Ensembl: | ENSG00000282164 |
| Gene Name: | trafficking protein particle complex subunit 9 |
| Gene Alias: | - |
| Gene Description: | paternally expressed 13 |
| Gene Type: | ncRNA |
| CpG%: | 0.04 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
