Difference between revisions of "TSS:Hg 997.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000361221. | + | |all_trans=ENST00000361221.8:0 NM_018125:0 NR_137288:0 NR_137287:0 AB046846:68 AK311076:141 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.205 | |cpg_percent=0.205 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=24 |
|end=17539767 | |end=17539767 | ||
|end_of_center_position=17539723 | |end_of_center_position=17539723 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_018125 | |nearest_refseq=NM_018125 | ||
|nearest_unigene=Hs.443460 | |nearest_unigene=Hs.443460 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=17539677 | |start=17539677 | ||
|start_of_center_position=17539722 | |start_of_center_position=17539722 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000361221. | + | |transcript_name=ENST00000361221.8 NM_018125 NR_137288 NR_137287 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_997.1 | |tss_id=hg_997.1 | ||
Revision as of 22:10, 18 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 17539722 |
|---|---|
| End of the center position in the TSS region: | 17539723 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000361221.8 NM_018125 NR_137288 NR_137287 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000361221.8:0 NM_018125:0 NR_137288:0 NR_137287:0 AB046846:68 AK311076:141 |
TATA-Box annotation
| Distance to TSS: | 24 |
|---|---|
| Nearest PromoterID: | NR_137287 |
| Entrez ID: | 55160 |
| Nearest Unigene: | Hs.443460 |
| Nearest Refseq: | NM_018125 |
| Nearest Ensembl: | ENSG00000074964 |
| Gene Name: | Rho guanine nucleotide exchange factor 10 like |
| Gene Alias: | GrinchGEF |
| Gene Description: | Rho guanine nucleotide exchange factor 10 like |
| Gene Type: | protein-coding |
| CpG%: | 0.205 |
| GC%: | 0.860697 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
