Difference between revisions of "TSS:Hg 9998.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000497965.5 | + | |HBP15= |
| + | |HBP15/L22= | ||
| + | |L22= | ||
| + | |all_trans=LF357510:8 MA593087:8 ENST00000497965.5:34 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=8 |
| − | |distance_to_tss=- | + | |distance_to_tss=-1284 |
|end=6200883 | |end=6200883 | ||
| + | |end_of_center_position=6200880 | ||
|entrez_id=6146 | |entrez_id=6146 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| − | |gene_alias=EAP | + | |gene_alias=EAP{{!}}HBP15{{!}}HBP15/L22{{!}}L22 |
|gene_description=ribosomal protein L22 | |gene_description=ribosomal protein L22 | ||
|gene_id=6146 | |gene_id=6146 | ||
| − | |gene_name= | + | |gene_name=RPL22 |
|gene_source=HGNC:10315 | |gene_source=HGNC:10315 | ||
|gene_symbol=RPL22 | |gene_symbol=RPL22 | ||
| Line 21: | Line 25: | ||
|nearest_refseq=NM_000983 | |nearest_refseq=NM_000983 | ||
|nearest_unigene=Hs.515329 | |nearest_unigene=Hs.515329 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=6200875 | |start=6200875 | ||
| + | |start_of_center_position=6200879 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF357510 MA593087 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_9998.1 | |tss_id=hg_9998.1 | ||
Latest revision as of 22:16, 18 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 6200879 |
|---|---|
| End of the center position in the TSS region: | 6200880 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF357510 MA593087 |
|---|---|
| Distance: | 8 |
| Num_trans: | 3 |
| All_trans: | LF357510:8 MA593087:8 ENST00000497965.5:34 |
TATA-Box annotation
| Distance to TSS: | -1284 |
|---|---|
| Nearest PromoterID: | NM_000983 |
| Entrez ID: | 6146 |
| Nearest Unigene: | Hs.515329 |
| Nearest Refseq: | NM_000983 |
| Nearest Ensembl: | ENSG00000116251 |
| Gene Name: | RPL22 |
| Gene Alias: | EAP|HBP15|HBP15/L22|L22 |
| Gene Description: | ribosomal protein L22 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
