Difference between revisions of "TSS:Mm 1.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 4: | Line 4: | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-3112 | |distance_to_tss=-3112 | ||
|end=3674612 | |end=3674612 | ||
| + | |end_of_center_position=3674611 | ||
|entrez_id=497097 | |entrez_id=497097 | ||
|gc_percent=0.348259 | |gc_percent=0.348259 | ||
| − | |gene_alias=AY534250 | + | |gene_alias=AY534250{{!}}Gm210{{!}}XRG4{{!}}mKIAA1889 |
|gene_description=X-linked Kx blood group related 4 | |gene_description=X-linked Kx blood group related 4 | ||
|gene_name=Xkr4 | |gene_name=Xkr4 | ||
| Line 21: | Line 22: | ||
|species=mouse | |species=mouse | ||
|start=3674608 | |start=3674608 | ||
| + | |start_of_center_position=3674610 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=23(CCTTTAATGCTC,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:04, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 3674610 |
|---|---|
| End of the center position in the TSS region: | 3674611 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -3112 |
|---|---|
| Nearest PromoterID: | NM_001011874 |
| Entrez ID: | 497097 |
| Nearest Unigene: | Mm.454496 |
| Nearest Refseq: | NM_001011874 |
| Nearest Ensembl: | ENSMUSG00000051951 |
| Gene Name: | Xkr4 |
| Gene Alias: | AY534250|Gm210|XRG4|mKIAA1889 |
| Gene Description: | X-linked Kx blood group related 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.348259 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 23(CCTTTAATGCTC,+,0.00) |
