Difference between revisions of "TSS:Mm 10003.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=uc007ecj.2:-196 |chr=chr1 |cpg_percent=0.03 |distance=-196 |distance_to_tss=34181 |end=191541366 |entrez_id=76843 |gc_percent=0.527363 |gene_alias=28100...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |5730564G15Rik= | ||
| + | |L2dtl= | ||
| + | |Ramp= | ||
|all_trans=uc007ecj.2:-196 | |all_trans=uc007ecj.2:-196 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=34181 | |distance_to_tss=34181 | ||
|end=191541366 | |end=191541366 | ||
| + | |end_of_center_position=191541363 | ||
|entrez_id=76843 | |entrez_id=76843 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| − | |gene_alias=2810047L02Rik | + | |gene_alias=2810047L02Rik{{!}}5730564G15Rik{{!}}L2dtl{{!}}Ramp |
|gene_description=denticleless E3 ubiquitin protein ligase | |gene_description=denticleless E3 ubiquitin protein ligase | ||
|gene_id=76843 | |gene_id=76843 | ||
| − | |gene_name= | + | |gene_name=Dtl |
|gene_source=MGI:1924093 | |gene_source=MGI:1924093 | ||
|gene_symbol=Dtl | |gene_symbol=Dtl | ||
| Line 18: | Line 22: | ||
|hgnc_mgi_id=MGI:1924093 | |hgnc_mgi_id=MGI:1924093 | ||
|nearest_ensembl=ENSMUSG00000037474 | |nearest_ensembl=ENSMUSG00000037474 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_029766 |
|nearest_refseq=NM_029766 | |nearest_refseq=NM_029766 | ||
|nearest_unigene=Mm.189102 | |nearest_unigene=Mm.189102 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=mouse | |species=mouse | ||
|start=191541359 | |start=191541359 | ||
| + | |start_of_center_position=191541362 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_10003.1 | |tss_id=mm_10003.1 | ||
Latest revision as of 16:07, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 191541362 |
|---|---|
| End of the center position in the TSS region: | 191541363 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | uc007ecj.2:-196 |
TATA-Box annotation
| Distance to TSS: | 34181 |
|---|---|
| Nearest PromoterID: | NM_029766 |
| Entrez ID: | 76843 |
| Nearest Unigene: | Mm.189102 |
| Nearest Refseq: | NM_029766 |
| Nearest Ensembl: | ENSMUSG00000037474 |
| Gene Name: | Dtl |
| Gene Alias: | 2810047L02Rik|5730564G15Rik|L2dtl|Ramp |
| Gene Description: | denticleless E3 ubiquitin protein ligase |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
