Difference between revisions of "TSS:Mm 100039.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |Cd300c= | ||
| + | |Cd300d= | ||
| + | |DIgR1= | ||
| + | |Igsf7= | ||
| + | |Lmir2= | ||
| + | |MAIR-II= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=5155 | |distance_to_tss=5155 | ||
|end=114996728 | |end=114996728 | ||
| + | |end_of_center_position=114996725 | ||
|entrez_id=140497 | |entrez_id=140497 | ||
|gc_percent=0.343284 | |gc_percent=0.343284 | ||
| − | |gene_alias=CLM4 | + | |gene_alias=CLM-4{{!}}CLM4{{!}}Cd300c{{!}}Cd300d{{!}}DIgR1{{!}}Igsf7{{!}}Lmir2{{!}}MAIR-II |
|gene_description=CD300C molecule 2 | |gene_description=CD300C molecule 2 | ||
|gene_name=Cd300c2 | |gene_name=Cd300c2 | ||
| Line 18: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=114996721 | |start=114996721 | ||
| + | |start_of_center_position=114996724 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-60(ACCTCTAAAAGA,-,0.00),-59(CCTCTAAAAGAG,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:07, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114996724 |
|---|---|
| End of the center position in the TSS region: | 114996725 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 5155 |
|---|---|
| Nearest PromoterID: | NM_134158 |
| Entrez ID: | 140497 |
| Nearest Unigene: | Mm.2699 |
| Nearest Refseq: | NM_134158 |
| Nearest Ensembl: | ENSMUSG00000044811 |
| Gene Name: | Cd300c2 |
| Gene Alias: | CLM-4|CLM4|Cd300c|Cd300d|DIgR1|Igsf7|Lmir2|MAIR-II |
| Gene Description: | CD300C molecule 2 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.343284 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -60(ACCTCTAAAAGA,-,0.00),-59(CCTCTAAAAGAG,+,0.00) |
