Difference between revisions of "TSS:Mm 10005.1"
From referenceTSS
| Line 3: | Line 3: | ||
|L2dtl= | |L2dtl= | ||
|Ramp= | |Ramp= | ||
| − | |all_trans=ENSMUST00000195650.5:0 ENSMUST00000195765.5:0 ENSMUST00000193977.5:0 ENSMUST00000194064.1:0 ENSMUST00000192014.1:0 AK154594:0 AK164249:0 AK169601:0 AK133177:0 AK166351:0 AB095735:0 AB095736:0 AK054412:0 AK164999:0 AK012919:0 AK045014:0 AK017855:0 BC060208:17 ENSMUST00000027933.10 | + | |all_trans=ENSMUST00000195650.5:0 ENSMUST00000195765.5:0 ENSMUST00000193977.5:0 ENSMUST00000194064.1:0 ENSMUST00000192014.1:0 AK154594:0 AK164249:0 AK169601:0 AK133177:0 AK166351:0 AB095735:0 AB095736:0 AK054412:0 AK164999:0 AK012919:0 AK045014:0 AK017855:0 BC060208:17 ENSMUST00000027933.10:-18 NM_001305233:-18 NM_029766:-18 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| Line 12: | Line 12: | ||
|entrez_id=76843 | |entrez_id=76843 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=2810047L02Rik | + | |gene_alias=2810047L02Rik{{!}}5730564G15Rik{{!}}L2dtl{{!}}Ramp |
|gene_description=denticleless E3 ubiquitin protein ligase | |gene_description=denticleless E3 ubiquitin protein ligase | ||
|gene_id=76843 | |gene_id=76843 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=MGI:1924093 | |hgnc_mgi_id=MGI:1924093 | ||
|nearest_ensembl=ENSMUSG00000037474 | |nearest_ensembl=ENSMUSG00000037474 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_029766 |
|nearest_refseq=NM_029766 | |nearest_refseq=NM_029766 | ||
|nearest_unigene=Mm.189102 | |nearest_unigene=Mm.189102 | ||
| − | |num_trans= | + | |num_trans=21 |
|species=mouse | |species=mouse | ||
|start=191575490 | |start=191575490 | ||
Revision as of 16:07, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 191575508 |
|---|---|
| End of the center position in the TSS region: | 191575509 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000195650.5 ENSMUST00000195765.5 ENSMUST00000193977.5 ENSMUST00000194064.1 ENSMUST00000192014.1 AK154594 AK164249 AK169601 AK133177 AK166351 AB095735 AB095736 AK054412 AK164999 AK012919 AK045014 AK017855 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | ENSMUST00000195650.5:0 ENSMUST00000195765.5:0 ENSMUST00000193977.5:0 ENSMUST00000194064.1:0 ENSMUST00000192014.1:0 AK154594:0 AK164249:0 AK169601:0 AK133177:0 AK166351:0 AB095735:0 AB095736:0 AK054412:0 AK164999:0 AK012919:0 AK045014:0 AK017855:0 BC060208:17 ENSMUST00000027933.10:-18 NM_001305233:-18 NM_029766:-18 |
TATA-Box annotation
| Distance to TSS: | 36 |
|---|---|
| Nearest PromoterID: | NM_029766 |
| Entrez ID: | 76843 |
| Nearest Unigene: | Mm.189102 |
| Nearest Refseq: | NM_029766 |
| Nearest Ensembl: | ENSMUSG00000037474 |
| Gene Name: | denticleless E3 ubiquitin protein ligase |
| Gene Alias: | 2810047L02Rik|5730564G15Rik|L2dtl|Ramp |
| Gene Description: | denticleless E3 ubiquitin protein ligase |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
