Difference between revisions of "TSS:Mm 100068.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=uc033gbg.1:147 |chr=chr11 |cpg_percent=0.065 |distance=147 |distance_to_tss=7092 |end=115412834 |entrez_id=71679 |gc_percent=0.567164 |gene_alias=061000...") |
|||
| (One intermediate revision by the same user not shown) | |||
| Line 3: | Line 3: | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=7092 | |distance_to_tss=7092 | ||
|end=115412834 | |end=115412834 | ||
| + | |end_of_center_position=115412828 | ||
|entrez_id=71679 | |entrez_id=71679 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=0610009D10Rik | + | |gene_alias=0610009D10Rik{{!}}Atp5pd |
| − | |gene_description= | + | |gene_description=ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D |
|gene_name=Atp5h | |gene_name=Atp5h | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 16: | Line 17: | ||
|nearest_refseq=NM_027862 | |nearest_refseq=NM_027862 | ||
|nearest_unigene=Mm.371641 | |nearest_unigene=Mm.371641 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=mouse | |species=mouse | ||
|start=115412820 | |start=115412820 | ||
| + | |start_of_center_position=115412827 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100068.1 | |tss_id=mm_100068.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:08, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115412827 |
|---|---|
| End of the center position in the TSS region: | 115412828 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | uc033gbg.1:147 |
TATA-Box annotation
| Distance to TSS: | 7092 |
|---|---|
| Nearest PromoterID: | NM_027862 |
| Entrez ID: | 71679 |
| Nearest Unigene: | Mm.371641 |
| Nearest Refseq: | NM_027862 |
| Nearest Ensembl: | ENSMUSG00000034566 |
| Gene Name: | Atp5h |
| Gene Alias: | 0610009D10Rik|Atp5pd |
| Gene Description: | ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
