Difference between revisions of "TSS:Mm 100086.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|BC023126= | |BC023126= | ||
| − | |all_trans=AK042345:13 ENSMUST00000126533.1:-61 AK146249:-86 ENSMUST00000136985.7:-105 ENSMUST00000140181.1:125 | + | |all_trans=AK042345:13 ENSMUST00000126533.1:-61 AK146249:-86 ENSMUST00000136985.7:-105 ENSMUST00000140181.1:125 BC023126:-126 ENSMUST00000035240.6:-136 NM_177778:-136 NM_001361594:-136 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
|distance=13 | |distance=13 | ||
| − | |distance_to_tss= | + | |distance_to_tss=149 |
|end=115475829 | |end=115475829 | ||
|end_of_center_position=115475816 | |end_of_center_position=115475816 | ||
|entrez_id=276905 | |entrez_id=276905 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=A630084C13 | + | |gene_alias=A630084C13{{!}}BC023126 |
|gene_description=armadillo repeat containing 7 | |gene_description=armadillo repeat containing 7 | ||
|gene_id=276905 | |gene_id=276905 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=MGI:2679719 | |hgnc_mgi_id=MGI:2679719 | ||
|nearest_ensembl=ENSMUSG00000057219 | |nearest_ensembl=ENSMUSG00000057219 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001361594 |
|nearest_refseq=NM_177778 | |nearest_refseq=NM_177778 | ||
|nearest_unigene=Mm.38019 | |nearest_unigene=Mm.38019 | ||
Revision as of 16:08, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 115475815 |
|---|---|
| End of the center position in the TSS region: | 115475816 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK042345 |
|---|---|
| Distance: | 13 |
| Num_trans: | 9 |
| All_trans: | AK042345:13 ENSMUST00000126533.1:-61 AK146249:-86 ENSMUST00000136985.7:-105 ENSMUST00000140181.1:125 BC023126:-126 ENSMUST00000035240.6:-136 NM_177778:-136 NM_001361594:-136 |
TATA-Box annotation
| Distance to TSS: | 149 |
|---|---|
| Nearest PromoterID: | NM_001361594 |
| Entrez ID: | 276905 |
| Nearest Unigene: | Mm.38019 |
| Nearest Refseq: | NM_177778 |
| Nearest Ensembl: | ENSMUSG00000057219 |
| Gene Name: | armadillo repeat containing 7 |
| Gene Alias: | A630084C13|BC023126 |
| Gene Description: | armadillo repeat containing 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
