Difference between revisions of "TSS:Mm 100087.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|BC023126= | |BC023126= | ||
| − | |all_trans=ENSMUST00000140181.1:-19 AK042345:-131 ENSMUST00000126533.1:-231 AK146249:-256 ENSMUST00000136985.7:-275 | + | |all_trans=ENSMUST00000140181.1:-19 AK042345:-131 ENSMUST00000126533.1:-231 AK146249:-256 ENSMUST00000136985.7:-275 BC023126:-296 ENSMUST00000035240.6:-306 NM_177778:-306 NM_001361594:-306 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=-19 | |distance=-19 | ||
| − | |distance_to_tss= | + | |distance_to_tss=307 |
|end=115475976 | |end=115475976 | ||
|end_of_center_position=115475975 | |end_of_center_position=115475975 | ||
|entrez_id=276905 | |entrez_id=276905 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=A630084C13 | + | |gene_alias=A630084C13{{!}}BC023126 |
|gene_description=armadillo repeat containing 7 | |gene_description=armadillo repeat containing 7 | ||
|gene_id=276905 | |gene_id=276905 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=MGI:2679719 | |hgnc_mgi_id=MGI:2679719 | ||
|nearest_ensembl=ENSMUSG00000057219 | |nearest_ensembl=ENSMUSG00000057219 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001361594 |
|nearest_refseq=NM_177778 | |nearest_refseq=NM_177778 | ||
|nearest_unigene=Mm.38019 | |nearest_unigene=Mm.38019 | ||
Revision as of 16:08, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115475974 |
|---|---|
| End of the center position in the TSS region: | 115475975 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000140181.1 |
|---|---|
| Distance: | -19 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000140181.1:-19 AK042345:-131 ENSMUST00000126533.1:-231 AK146249:-256 ENSMUST00000136985.7:-275 BC023126:-296 ENSMUST00000035240.6:-306 NM_177778:-306 NM_001361594:-306 |
TATA-Box annotation
| Distance to TSS: | 307 |
|---|---|
| Nearest PromoterID: | NM_001361594 |
| Entrez ID: | 276905 |
| Nearest Unigene: | Mm.38019 |
| Nearest Refseq: | NM_177778 |
| Nearest Ensembl: | ENSMUSG00000057219 |
| Gene Name: | armadillo repeat containing 7 |
| Gene Alias: | A630084C13|BC023126 |
| Gene Description: | armadillo repeat containing 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
