Difference between revisions of "TSS:Mm 100092.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000058109.8:0 AB341708:1 AK131937:171 | + | |all_trans=ENSMUST00000058109.8:0 LF198983:0 MA434560:0 AB341708:1 NM_025305:171 AK131937:171 AK012225:182 BC049636:182 AK162024:204 AK009251:218 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| Line 9: | Line 9: | ||
|entrez_id=260302 | |entrez_id=260302 | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
| − | |gene_alias=C230037M19Rik | + | |gene_alias=C230037M19Rik{{!}}mKIAA0154 |
| − | |gene_description= | + | |gene_description=golgi associated, gamma adaptin ear containing, ARF binding protein 3 |
|gene_id=50529 | |gene_id=50529 | ||
|gene_name=mitchondrial ribosomal protein S7 | |gene_name=mitchondrial ribosomal protein S7 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_173048 | |nearest_refseq=NM_173048 | ||
|nearest_unigene=Mm.119479 | |nearest_unigene=Mm.119479 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=mouse | |species=mouse | ||
|start=115603920 | |start=115603920 | ||
|start_of_center_position=115603944 | |start_of_center_position=115603944 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000058109.8 | + | |transcript_name=ENSMUST00000058109.8 LF198983 MA434560 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100092.1 | |tss_id=mm_100092.1 | ||
Revision as of 16:08, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115603944 |
|---|---|
| End of the center position in the TSS region: | 115603945 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000058109.8 LF198983 MA434560 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENSMUST00000058109.8:0 LF198983:0 MA434560:0 AB341708:1 NM_025305:171 AK131937:171 AK012225:182 BC049636:182 AK162024:204 AK009251:218 |
TATA-Box annotation
| Distance to TSS: | -29 |
|---|---|
| Nearest PromoterID: | NM_173048 |
| Entrez ID: | 260302 |
| Nearest Unigene: | Mm.119479 |
| Nearest Refseq: | NM_173048 |
| Nearest Ensembl: | ENSMUSG00000020740 |
| Gene Name: | mitchondrial ribosomal protein S7 |
| Gene Alias: | C230037M19Rik|mKIAA0154 |
| Gene Description: | golgi associated, gamma adaptin ear containing, ARF binding protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
