Difference between revisions of "TSS:Mm 100094.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Rpms7= | |Rpms7= | ||
| − | |all_trans=NM_025305 | + | |all_trans=NM_025305:0 AK131937:0 AK012225:0 BC049636:0 AK162024:9 AK009251:23 AB341708:-161 ENSMUST00000058109.8:-206 LF198983:-207 MA434560:-207 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=7 |
|end=115604164 | |end=115604164 | ||
|end_of_center_position=115604148 | |end_of_center_position=115604148 | ||
|entrez_id=50529 | |entrez_id=50529 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=MRP-S7 | + | |gene_alias=MRP-S7{{!}}Rpms7{{!}}S7mt |
|gene_description=mitchondrial ribosomal protein S7 | |gene_description=mitchondrial ribosomal protein S7 | ||
|gene_id=50529 | |gene_id=50529 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_025305 | |nearest_refseq=NM_025305 | ||
|nearest_unigene=Mm.193040 | |nearest_unigene=Mm.193040 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=mouse | |species=mouse | ||
|start=115604130 | |start=115604130 | ||
|start_of_center_position=115604147 | |start_of_center_position=115604147 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_025305 | + | |transcript_name=NM_025305 AK131937 AK012225 BC049636 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100094.1 | |tss_id=mm_100094.1 | ||
Revision as of 16:08, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115604147 |
|---|---|
| End of the center position in the TSS region: | 115604148 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_025305 AK131937 AK012225 BC049636 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | NM_025305:0 AK131937:0 AK012225:0 BC049636:0 AK162024:9 AK009251:23 AB341708:-161 ENSMUST00000058109.8:-206 LF198983:-207 MA434560:-207 |
TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NM_025305 |
| Entrez ID: | 50529 |
| Nearest Unigene: | Mm.193040 |
| Nearest Refseq: | NM_025305 |
| Nearest Ensembl: | ENSMUSG00000046756 |
| Gene Name: | mitchondrial ribosomal protein S7 |
| Gene Alias: | MRP-S7|Rpms7|S7mt |
| Gene Description: | mitchondrial ribosomal protein S7 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
