Difference between revisions of "TSS:Mm 1001.1"
From referenceTSS
| Line 21: | Line 21: | ||
|entrez_id=12633 | |entrez_id=12633 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
| − | |gene_alias=2310024N18Rik | + | |gene_alias=2310024N18Rik{{!}}A430105C05Rik{{!}}CLARP{{!}}Cash{{!}}Casper{{!}}FLAME{{!}}FLAME-1{{!}}Flip{{!}}Gm9845{{!}}I-FLICE{{!}}MRIT{{!}}c-Flip |
|gene_description=CASP8 and FADD-like apoptosis regulator | |gene_description=CASP8 and FADD-like apoptosis regulator | ||
|gene_id=12633 | |gene_id=12633 | ||
| Line 31: | Line 31: | ||
|hgnc_mgi_id=MGI:1336166 | |hgnc_mgi_id=MGI:1336166 | ||
|nearest_ensembl=ENSMUSG00000026031 | |nearest_ensembl=ENSMUSG00000026031 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_009805 |
|nearest_refseq=NM_009805 | |nearest_refseq=NM_009805 | ||
|nearest_unigene=Mm.336848 | |nearest_unigene=Mm.336848 | ||
| Line 39: | Line 39: | ||
|start_of_center_position=58714319 | |start_of_center_position=58714319 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=88(GCCTTTAAAAAA,-,0.00) |
|transcript_name=ENSMUST00000189858.1 AK053567 | |transcript_name=ENSMUST00000189858.1 AK053567 | ||
|tss_classification=no | |tss_classification=no | ||
Revision as of 16:09, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 58714319 |
|---|---|
| End of the center position in the TSS region: | 58714320 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000189858.1 AK053567 |
|---|---|
| Distance: | -431 |
| Num_trans: | 2 |
| All_trans: | ENSMUST00000189858.1:-431 AK053567:-431 |
TATA-Box annotation
| Distance to TSS: | 1034 |
|---|---|
| Nearest PromoterID: | NM_009805 |
| Entrez ID: | 12633 |
| Nearest Unigene: | Mm.336848 |
| Nearest Refseq: | NM_009805 |
| Nearest Ensembl: | ENSMUSG00000026031 |
| Gene Name: | CASP8 and FADD-like apoptosis regulator |
| Gene Alias: | 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip |
| Gene Description: | CASP8 and FADD-like apoptosis regulator |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 88(GCCTTTAAAAAA,-,0.00) |
