Difference between revisions of "TSS:Mm 100106.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000103033.7:-481 AK122217:-481 |chr=chr11 |cpg_percent=0.015 |distance=-481 |distance_to_tss=10824 |end=115776277 |entrez_id=71947 |gc_percent=...") |
|||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000103033.7:-481 AK122217:-481 | + | |Kiaa0195= |
| + | |all_trans=LF231417:211 MA466994:211 ENSMUST00000103033.7:-481 AK122217:-481 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=211 |
|distance_to_tss=10824 | |distance_to_tss=10824 | ||
|end=115776277 | |end=115776277 | ||
| + | |end_of_center_position=115776257 | ||
|entrez_id=71947 | |entrez_id=71947 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| − | |gene_alias=2310067B10Rik | + | |gene_alias=2310067B10Rik{{!}}Kiaa0195{{!}}mKIAA0195 |
|gene_description=transmembrane protein 94 | |gene_description=transmembrane protein 94 | ||
|gene_id=71947 | |gene_id=71947 | ||
| − | |gene_name= | + | |gene_name=Tmem94 |
|gene_source=MGI:1919197 | |gene_source=MGI:1919197 | ||
|gene_symbol=Tmem94 | |gene_symbol=Tmem94 | ||
| Line 17: | Line 19: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1919197 | |hgnc_mgi_id=MGI:1919197 | ||
| + | |mKIAA0195= | ||
|nearest_ensembl=ENSMUSG00000020747 | |nearest_ensembl=ENSMUSG00000020747 | ||
|nearest_promoter_id=NM_028014 | |nearest_promoter_id=NM_028014 | ||
|nearest_refseq=NM_028014 | |nearest_refseq=NM_028014 | ||
|nearest_unigene=Mm.23168 | |nearest_unigene=Mm.23168 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=mouse | |species=mouse | ||
|start=115776236 | |start=115776236 | ||
| + | |start_of_center_position=115776256 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=77(TCTTTTATGGGT,+,0.00) |
| − | |transcript_name= | + | |transcript_name=LF231417 MA466994 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_100106.1 | |tss_id=mm_100106.1 | ||
Latest revision as of 16:09, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115776256 |
|---|---|
| End of the center position in the TSS region: | 115776257 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF231417 MA466994 |
|---|---|
| Distance: | 211 |
| Num_trans: | 4 |
| All_trans: | LF231417:211 MA466994:211 ENSMUST00000103033.7:-481 AK122217:-481 |
TATA-Box annotation
| Distance to TSS: | 10824 |
|---|---|
| Nearest PromoterID: | NM_028014 |
| Entrez ID: | 71947 |
| Nearest Unigene: | Mm.23168 |
| Nearest Refseq: | NM_028014 |
| Nearest Ensembl: | ENSMUSG00000020747 |
| Gene Name: | Tmem94 |
| Gene Alias: | 2310067B10Rik|Kiaa0195|mKIAA0195 |
| Gene Description: | transmembrane protein 94 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 77(TCTTTTATGGGT,+,0.00) |
