Difference between revisions of "TSS:Mm 100113.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Llglh2= | |Llglh2= | ||
| − | |all_trans=ENSMUST00000103032.10:0 ENSMUST00000133250.7:0 ENSMUST00000177736.7:0 NM_001252532:0 NM_145438 | + | |all_trans=ENSMUST00000103032.10:0 ENSMUST00000133250.7:0 ENSMUST00000177736.7:0 NM_001252532:0 NM_145438:0 AK143486:0 BC037226:0 AK167536:0 AK143798:0 AY033650:11 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| Line 10: | Line 10: | ||
|entrez_id=217325 | |entrez_id=217325 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| − | |gene_alias=9130006H11Rik | + | |gene_alias=9130006H11Rik{{!}}Llglh2 |
| − | |gene_description= | + | |gene_description=LLGL2 scribble cell polarity complex component |
|gene_id=217325 | |gene_id=217325 | ||
| − | |gene_name= | + | |gene_name=LLGL2 scribble cell polarity complex component |
|gene_source=MGI:1918843 | |gene_source=MGI:1918843 | ||
|gene_symbol=Llgl2 | |gene_symbol=Llgl2 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_145438 | |nearest_refseq=NM_145438 | ||
|nearest_unigene=Mm.290450 | |nearest_unigene=Mm.290450 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=mouse | |species=mouse | ||
|start=115824029 | |start=115824029 | ||
|start_of_center_position=115824063 | |start_of_center_position=115824063 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000103032.10 ENSMUST00000133250.7 ENSMUST00000177736.7 NM_001252532 NM_145438 | + | |transcript_name=ENSMUST00000103032.10 ENSMUST00000133250.7 ENSMUST00000177736.7 NM_001252532 NM_145438 AK143486 BC037226 AK167536 AK143798 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100113.1 | |tss_id=mm_100113.1 | ||
Revision as of 16:09, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115824063 |
|---|---|
| End of the center position in the TSS region: | 115824064 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000103032.10 ENSMUST00000133250.7 ENSMUST00000177736.7 NM_001252532 NM_145438 AK143486 BC037226 AK167536 AK143798 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENSMUST00000103032.10:0 ENSMUST00000133250.7:0 ENSMUST00000177736.7:0 NM_001252532:0 NM_145438:0 AK143486:0 BC037226:0 AK167536:0 AK143798:0 AY033650:11 |
TATA-Box annotation
| Distance to TSS: | 5 |
|---|---|
| Nearest PromoterID: | NM_001252532 |
| Entrez ID: | 217325 |
| Nearest Unigene: | Mm.290450 |
| Nearest Refseq: | NM_145438 |
| Nearest Ensembl: | ENSMUSG00000020782 |
| Gene Name: | LLGL2 scribble cell polarity complex component |
| Gene Alias: | 9130006H11Rik|Llglh2 |
| Gene Description: | LLGL2 scribble cell polarity complex component |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
