Difference between revisions of "TSS:Mm 100124.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000132961.1:0 NM_001162998 | + | |all_trans=ENSMUST00000132961.1:0 NM_001162998:0 AK003745:0 AK156823:-42 BC038330:314 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 9: | Line 9: | ||
|entrez_id=68528 | |entrez_id=68528 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias=1110017F19Rik | + | |gene_alias=1110017F19Rik{{!}}Eln |
|gene_description=small integral membrane protein 6 | |gene_description=small integral membrane protein 6 | ||
|gene_id=68528 | |gene_id=68528 | ||
| Line 15: | Line 15: | ||
|gene_source=MGI:1915778 | |gene_source=MGI:1915778 | ||
|gene_symbol=Smim6 | |gene_symbol=Smim6 | ||
| − | |gene_synonyms=1110017F19Rik | + | |gene_synonyms=1110017F19Rik ELN endoregulin |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1915778 | |hgnc_mgi_id=MGI:1915778 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001162998 | |nearest_refseq=NM_001162998 | ||
|nearest_unigene=Mm.441893 | |nearest_unigene=Mm.441893 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=mouse | |species=mouse | ||
|start=115912001 | |start=115912001 | ||
|start_of_center_position=115912013 | |start_of_center_position=115912013 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000132961.1 NM_001162998 | + | |transcript_name=ENSMUST00000132961.1 NM_001162998 AK003745 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_100124.1 | |tss_id=mm_100124.1 | ||
Revision as of 16:09, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115912013 |
|---|---|
| End of the center position in the TSS region: | 115912014 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000132961.1 NM_001162998 AK003745 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | ENSMUST00000132961.1:0 NM_001162998:0 AK003745:0 AK156823:-42 BC038330:314 |
TATA-Box annotation
| Distance to TSS: | -4 |
|---|---|
| Nearest PromoterID: | NM_001162998 |
| Entrez ID: | 68528 |
| Nearest Unigene: | Mm.441893 |
| Nearest Refseq: | NM_001162998 |
| Nearest Ensembl: | ENSMUSG00000075420 |
| Gene Name: | small integral membrane protein 6 |
| Gene Alias: | 1110017F19Rik|Eln |
| Gene Description: | small integral membrane protein 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
