Difference between revisions of "TSS:Mm 100127.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC038330:4 ENSMUST00000132961.1:-299 NM_001162998 | + | |all_trans=BC038330:4 ENSMUST00000132961.1:-299 NM_001162998:-299 AK003745:-299 AK156823:-356 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 9: | Line 9: | ||
|entrez_id=68528 | |entrez_id=68528 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=1110017F19Rik | + | |gene_alias=1110017F19Rik{{!}}Eln |
|gene_description=small integral membrane protein 6 | |gene_description=small integral membrane protein 6 | ||
|gene_id=68528 | |gene_id=68528 | ||
| Line 15: | Line 15: | ||
|gene_source=MGI:1915778 | |gene_source=MGI:1915778 | ||
|gene_symbol=Smim6 | |gene_symbol=Smim6 | ||
| − | |gene_synonyms=1110017F19Rik | + | |gene_synonyms=1110017F19Rik ELN endoregulin |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1915778 | |hgnc_mgi_id=MGI:1915778 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001162998 | |nearest_refseq=NM_001162998 | ||
|nearest_unigene=Mm.441893 | |nearest_unigene=Mm.441893 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=mouse | |species=mouse | ||
|start=115912315 | |start=115912315 | ||
Revision as of 16:09, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115912325 |
|---|---|
| End of the center position in the TSS region: | 115912326 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC038330 |
|---|---|
| Distance: | 4 |
| Num_trans: | 5 |
| All_trans: | BC038330:4 ENSMUST00000132961.1:-299 NM_001162998:-299 AK003745:-299 AK156823:-356 |
TATA-Box annotation
| Distance to TSS: | 308 |
|---|---|
| Nearest PromoterID: | NM_001162998 |
| Entrez ID: | 68528 |
| Nearest Unigene: | Mm.441893 |
| Nearest Refseq: | NM_001162998 |
| Nearest Ensembl: | ENSMUSG00000075420 |
| Gene Name: | small integral membrane protein 6 |
| Gene Alias: | 1110017F19Rik|Eln |
| Gene Description: | small integral membrane protein 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
