Difference between revisions of "TSS:Mm 10014.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000180429.2:21 AK076393:22 DQ704383:77 | + | |all_trans=ENSMUST00000226862.1:5 ENSMUST00000180429.2:21 AK076393:22 DQ704383:77 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| − | |distance= | + | |distance=5 |
|distance_to_tss=8485 | |distance_to_tss=8485 | ||
|end=191990155 | |end=191990155 | ||
| Line 12: | Line 12: | ||
|gene_description=microRNA 3473c | |gene_description=microRNA 3473c | ||
|gene_id= | |gene_id= | ||
| − | |gene_name= | + | |gene_name=predicted gene, 26670 |
|gene_source=MGI:5477164 | |gene_source=MGI:5477164 | ||
|gene_symbol=Gm26670 | |gene_symbol=Gm26670 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_039566 | |nearest_refseq=NR_039566 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=4 |
|species=mouse | |species=mouse | ||
|start=191990142 | |start=191990142 | ||
|start_of_center_position=191990148 | |start_of_center_position=191990148 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENSMUST00000226862.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_10014.1 | |tss_id=mm_10014.1 | ||
Revision as of 16:10, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 191990148 |
|---|---|
| End of the center position in the TSS region: | 191990149 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000226862.1 |
|---|---|
| Distance: | 5 |
| Num_trans: | 4 |
| All_trans: | ENSMUST00000226862.1:5 ENSMUST00000180429.2:21 AK076393:22 DQ704383:77 |
TATA-Box annotation
| Distance to TSS: | 8485 |
|---|---|
| Nearest PromoterID: | NR_039566 |
| Entrez ID: | 100628582 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_039566 |
| Nearest Ensembl: | ENSMUSG00000093003 |
| Gene Name: | predicted gene, 26670 |
| Gene Alias: | mmu-mir-3473c |
| Gene Description: | microRNA 3473c |
| Gene Type: | ncRNA |
| CpG%: | 0.065 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
