Difference between revisions of "TSS:Mm 100149.1"
From referenceTSS
| Line 2: | Line 2: | ||
|Zc3h5= | |Zc3h5= | ||
|Zc3hdc5= | |Zc3hdc5= | ||
| − | |all_trans=BC054452:-287 AK134361:-314 AK129438:-328 AK078095:-340 ENSMUST00000176788.1:-343 ENSMUST00000021116.11:-344 ENSMUST00000106452.1:-344 AK046395:-344 | + | |all_trans=BC054452:-287 AK134361:-314 AK129438:-328 AK078095:-340 ENSMUST00000176788.1:-343 ENSMUST00000021116.11:-344 ENSMUST00000106452.1:-344 AK046395:-344 NM_001286006:-350 NM_172569:-350 AK077635:-350 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| Line 11: | Line 11: | ||
|entrez_id=217331 | |entrez_id=217331 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| − | |gene_alias=B230379M23Rik | + | |gene_alias=B230379M23Rik{{!}}Unkh{{!}}Zc3h5{{!}}Zc3hdc5{{!}}mKIAA1753 |
|gene_description=unkempt family zinc finger | |gene_description=unkempt family zinc finger | ||
|gene_id=217331 | |gene_id=217331 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_172569 | |nearest_refseq=NM_172569 | ||
|nearest_unigene=Mm.297706 | |nearest_unigene=Mm.297706 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=mouse | |species=mouse | ||
|start=116030665 | |start=116030665 | ||
Revision as of 16:10, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 116030681 |
|---|---|
| End of the center position in the TSS region: | 116030682 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC054452 |
|---|---|
| Distance: | -287 |
| Num_trans: | 11 |
| All_trans: | BC054452:-287 AK134361:-314 AK129438:-328 AK078095:-340 ENSMUST00000176788.1:-343 ENSMUST00000021116.11:-344 ENSMUST00000106452.1:-344 AK046395:-344 NM_001286006:-350 NM_172569:-350 AK077635:-350 |
TATA-Box annotation
| Distance to TSS: | 366 |
|---|---|
| Nearest PromoterID: | NM_172569 |
| Entrez ID: | 217331 |
| Nearest Unigene: | Mm.297706 |
| Nearest Refseq: | NM_172569 |
| Nearest Ensembl: | ENSMUSG00000020770 |
| Gene Name: | unkempt family zinc finger |
| Gene Alias: | B230379M23Rik|Unkh|Zc3h5|Zc3hdc5|mKIAA1753 |
| Gene Description: | unkempt family zinc finger |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
