Difference between revisions of "TSS:Mm 100151.1"
From referenceTSS
| Line 2: | Line 2: | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-5203 | |distance_to_tss=-5203 | ||
|end=116092200 | |end=116092200 | ||
| Line 13: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSMUSG00000034341 | |nearest_ensembl=ENSMUSG00000034341 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_016852 |
|nearest_refseq=NM_016852 | |nearest_refseq=NM_016852 | ||
|nearest_unigene=Mm.284792 | |nearest_unigene=Mm.284792 | ||
| Line 21: | Line 21: | ||
|start_of_center_position=116092198 | |start_of_center_position=116092198 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-53(GACCTTAAATGG,-,0.00),-51(CCTTAAATGGCA,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:10, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 116092198 |
|---|---|
| End of the center position in the TSS region: | 116092199 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -5203 |
|---|---|
| Nearest PromoterID: | NM_016852 |
| Entrez ID: | 22378 |
| Nearest Unigene: | Mm.284792 |
| Nearest Refseq: | NM_016852 |
| Nearest Ensembl: | ENSMUSG00000034341 |
| Gene Name: | Wbp2 |
| Gene Alias: | - |
| Gene Description: | WW domain binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -53(GACCTTAAATGG,-,0.00),-51(CCTTAAATGGCA,+,0.00) |
