Difference between revisions of "TSS:Mm 100161.1"
From referenceTSS
| Line 2: | Line 2: | ||
|D030012E24Rik= | |D030012E24Rik= | ||
|Fam100b= | |Fam100b= | ||
| − | |all_trans=ENSMUST00000057676.6:16 NM_176902 | + | |all_trans=ENSMUST00000057676.6:16 NM_176902:16 AK144901:16 NR_003376:135 AK050732:135 BC119080:159 BC116983:160 ENSMUST00000144310.1:431 BC080725:474 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| Line 11: | Line 11: | ||
|entrez_id=319370 | |entrez_id=319370 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=1110014K08Rik | + | |gene_alias=1110014K08Rik{{!}}D030012E24Rik{{!}}Fam100b |
|gene_description=UBA-like domain containing 2 | |gene_description=UBA-like domain containing 2 | ||
|gene_id=319370 | |gene_id=319370 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_176902 | |nearest_refseq=NM_176902 | ||
|nearest_unigene=Mm.258466 | |nearest_unigene=Mm.258466 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=mouse | |species=mouse | ||
|start=116434067 | |start=116434067 | ||
|start_of_center_position=116434072 | |start_of_center_position=116434072 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000057676.6 NM_176902 | + | |transcript_name=ENSMUST00000057676.6 NM_176902 AK144901 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100161.1 | |tss_id=mm_100161.1 | ||
Revision as of 16:10, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 116434072 |
|---|---|
| End of the center position in the TSS region: | 116434073 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000057676.6 NM_176902 AK144901 |
|---|---|
| Distance: | 16 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000057676.6:16 NM_176902:16 AK144901:16 NR_003376:135 AK050732:135 BC119080:159 BC116983:160 ENSMUST00000144310.1:431 BC080725:474 |
TATA-Box annotation
| Distance to TSS: | -21 |
|---|---|
| Nearest PromoterID: | NM_176902 |
| Entrez ID: | 319370 |
| Nearest Unigene: | Mm.258466 |
| Nearest Refseq: | NM_176902 |
| Nearest Ensembl: | ENSMUSG00000050628 |
| Gene Name: | UBA-like domain containing 2 |
| Gene Alias: | 1110014K08Rik|D030012E24Rik|Fam100b |
| Gene Description: | UBA-like domain containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
