Difference between revisions of "TSS:Mm 100163.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NR_003376:0 AK050732:0 BC119080:10 BC116983:11 ENSMUST00000057676.6:-101 NM_176902 | + | |all_trans=NR_003376:0 AK050732:0 BC119080:10 BC116983:11 ENSMUST00000057676.6:-101 NM_176902:-101 AK144901:-101 ENSMUST00000144310.1:282 BC080725:325 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_003376 | |nearest_refseq=NR_003376 | ||
|nearest_unigene=Mm.258466 | |nearest_unigene=Mm.258466 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=mouse | |species=mouse | ||
|start=116434194 | |start=116434194 | ||
Revision as of 16:10, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 116434210 |
|---|---|
| End of the center position in the TSS region: | 116434211 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NR_003376 AK050732 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | NR_003376:0 AK050732:0 BC119080:10 BC116983:11 ENSMUST00000057676.6:-101 NM_176902:-101 AK144901:-101 ENSMUST00000144310.1:282 BC080725:325 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NR_003376 |
| Entrez ID: | 664849 |
| Nearest Unigene: | Mm.258466 |
| Nearest Refseq: | NR_003376 |
| Nearest Ensembl: | |
| Gene Name: | UBA-like domain containing 2; predicted pseudogene 7367 |
| Gene Alias: | EG664849 |
| Gene Description: | 1110014K08Rik pseudogene |
| Gene Type: | pseudo |
| CpG%: | 0.175 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
