Difference between revisions of "TSS:Mm 100180.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.055 |distance= |distance_to_tss=-167 |end=116624430 |entrez_id=217344 |gc_percent=0.58209 |gene_alias=4732465I17Rik|Rhbdl6|cub |gene_desc...") |
|||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |Rhbdl6= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance= | + | |cub= |
| + | |distance=NA | ||
|distance_to_tss=-167 | |distance_to_tss=-167 | ||
|end=116624430 | |end=116624430 | ||
| + | |end_of_center_position=116624420 | ||
|entrez_id=217344 | |entrez_id=217344 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| − | |gene_alias=4732465I17Rik | + | |gene_alias=4732465I17Rik{{!}}Rhbdl6{{!}}cub |
|gene_description=rhomboid 5 homolog 2 | |gene_description=rhomboid 5 homolog 2 | ||
|gene_name=Rhbdf2 | |gene_name=Rhbdf2 | ||
| Line 18: | Line 21: | ||
|species=mouse | |species=mouse | ||
|start=116624408 | |start=116624408 | ||
| + | |start_of_center_position=116624419 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-6(CCACTTATGGCC,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:10, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 116624419 |
|---|---|
| End of the center position in the TSS region: | 116624420 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -167 |
|---|---|
| Nearest PromoterID: | NM_001167680 |
| Entrez ID: | 217344 |
| Nearest Unigene: | Mm.89695 |
| Nearest Refseq: | NM_172572 |
| Nearest Ensembl: | ENSMUSG00000020806 |
| Gene Name: | Rhbdf2 |
| Gene Alias: | 4732465I17Rik|Rhbdl6|cub |
| Gene Description: | rhomboid 5 homolog 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -6(CCACTTATGGCC,+,0.00) |
