Difference between revisions of "TSS:Mm 100189.1"
From referenceTSS
| Line 2: | Line 2: | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-26732 | |distance_to_tss=-26732 | ||
|end=116725437 | |end=116725437 | ||
| Line 21: | Line 21: | ||
|start_of_center_position=116725435 | |start_of_center_position=116725435 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-30(GCTTATAGAGCT,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:11, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 116725435 |
|---|---|
| End of the center position in the TSS region: | 116725436 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -26732 |
|---|---|
| Nearest PromoterID: | NR_003364 |
| Entrez ID: | 193217 |
| Nearest Unigene: | Mm.100084 |
| Nearest Refseq: | NR_003364 |
| Nearest Ensembl: | |
| Gene Name: | BC018473 |
| Gene Alias: | - |
| Gene Description: | cDNA sequence BC018473 |
| Gene Type: | ncRNA |
| CpG%: | 0.04 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -30(GCTTATAGAGCT,+,0.00) |
