Difference between revisions of "TSS:Mm 10019.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000195526.1:-97 | + | |all_trans=ENSMUST00000195526.1:-97 LF220808:139 MA456385:139 LF193103:-175 MA428680:-175 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 12: | Line 12: | ||
|gene_description=TNF receptor-associated factor 5 | |gene_description=TNF receptor-associated factor 5 | ||
|gene_id= | |gene_id= | ||
| − | |gene_name= | + | |gene_name=glutathione S-transferase, pi, pseudogene |
|gene_source=MGI:3782108 | |gene_source=MGI:3782108 | ||
| − | |gene_symbol= | + | |gene_symbol=Gstp-ps |
| − | |gene_synonyms=Gm37208 | + | |gene_synonyms=Gm37208 Gm3934 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:3782108 | |hgnc_mgi_id=MGI:3782108 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_011633 | |nearest_refseq=NM_011633 | ||
|nearest_unigene=Mm.380491 | |nearest_unigene=Mm.380491 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=mouse | |species=mouse | ||
|start=192074322 | |start=192074322 | ||
Revision as of 16:11, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 192074337 |
|---|---|
| End of the center position in the TSS region: | 192074338 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000195526.1 |
|---|---|
| Distance: | -97 |
| Num_trans: | 5 |
| All_trans: | ENSMUST00000195526.1:-97 LF220808:139 MA456385:139 LF193103:-175 MA428680:-175 |
TATA-Box annotation
| Distance to TSS: | 18261 |
|---|---|
| Nearest PromoterID: | NM_011633 |
| Entrez ID: | 22033 |
| Nearest Unigene: | Mm.380491 |
| Nearest Refseq: | NM_011633 |
| Nearest Ensembl: | |
| Gene Name: | glutathione S-transferase, pi, pseudogene |
| Gene Alias: | - |
| Gene Description: | TNF receptor-associated factor 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
